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The map label for this gene is sufD [H]

Identifier: 187734996

GI number: 187734996

Start: 576508

End: 577761

Strand: Direct

Name: sufD [H]

Synonym: Amuc_0489

Alternate gene names: 187734996

Gene position: 576508-577761 (Clockwise)

Preceding gene: 187734995

Following gene: 187734998

Centisome position: 21.64

GC content: 57.02

Gene sequence:

>1254_bases
ATGAACCACTTGCTTAACGAAGAACAATTTTCCGCAGGCTTTCTTCCCGCATGGTTTGAAGCCCGGCGCCGCCATGCCCT
GGAACAGGCGGAACGGCTTCCGGAACCTTCCCGCCGCATGGAATCCTGGCGTTTCGGCACCCCCGGCAACGAATCCCTGG
AACATGTTGAAGCAGCCCTTCCTGTGGCGCCGGAAGCCTTGGCCCCCATCATCAGGGAACATGCCTCCATGCCGGAGGCC
CTCCGCATTGTTTACGCCAACGGGCTCCCCGTATCCCTTCCGGAAGAGCTTCCGGAAGGGCTTTCCGTCATGGATATGGA
AGACTTTGTGCTCCAATGCCCGGACACCGCCCGGAAATATTTGGAAACAGAGACGGAAACGCTCGGTTCCGAAAAACTGT
CGGCATTGACTATGGCTCTCCAGCACAACGGGCTGGTTATTATGGCGGACAGGGAAATCTCTCTCCCTCTGGAAATACTC
CACTTCATTTCCGGAGATAACGTGGCCGTTTTTCCCTCTACGCTGCTCATTGCGGAAACCGGAAGCCGCCTGCACATTCT
GGAACGCCACCTTAGCGCAGACCATGGCCGCCAATTCTGCGGAGCGCTCCAGCAATACCACCTTTCCTCCGCGTCATCTG
TCAAATACGCGCTGGTTCAGGAACTTAACAGCCGTTCCCGTGCCGTGGAGCTTTCCCATATTATGGCGGATGATTCCGCG
GAAATGGAACATCTCGTCAGCCATCCCGGCGCAGCCTGGGCCAGACAGGAGACGGTCTGCATCCTGAACGGAGACGGCGC
AGGAGTCCGCCTGCTTTCCGCCAACCATCTGAAGGAAAACAAGGAGCTGGACCAGAGGACCTGCCAGAAGCACCTTTACC
GCGGAGCCTCCAGCAACCTGCTTTATGCCAATGTGCTTGACGATGAAGCCAGCAGCATTTTCAGCGGCATGATCCTGGTG
GCGGAAGGCGCGCATGACACCAGCGCCTATCAAAGCAACCGCAATCTCATTCTCAGCCCCAGAGCGGAAGCCAACTCCAT
TCCCGGCCTGGAAATCCTGGCGGACAGAGTGCAGTGTTCGCACGGTTCCGCCACTTCCTCCATTTCCCCGGAAGAAATTT
TCTACCTGCTTTCACGGGGCATTCCGGAACAGACGGCGCGCAGAATGATTGCCCAGGGCTTTCTGAAACATGTCTTGGAC
CAATTCGGCGATGAAACCATACGTACCGCGGTAGAAAGCATCATCCTGCCCTGA

Upstream 100 bases:

>100_bases
TTAACGACCTCGTTCAGGAATTCCCCATGGAATACTCTGTGGAGCTGCGCAGGCTCATTGATCTGGAAATGGAAGACAGC
ATCGGATAAGGAGGGAAATA

Downstream 100 bases:

>100_bases
CCGCTATTTCATGAAACCCAAAAAGACGGAGAGACGGTCCCCTATCCCTCCTTTTCCGTCCTGATATTAACGCGCCGCTG
CAAGAGAGCCGCCACAAGCA

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MNHLLNEEQFSAGFLPAWFEARRRHALEQAERLPEPSRRMESWRFGTPGNESLEHVEAALPVAPEALAPIIREHASMPEA
LRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDTARKYLETETETLGSEKLSALTMALQHNGLVIMADREISLPLEIL
HFISGDNVAVFPSTLLIAETGSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMADDSA
EMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGASSNLLYANVLDDEASSIFSGMILV
AEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADRVQCSHGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLD
QFGDETIRTAVESIILP

Sequences:

>Translated_417_residues
MNHLLNEEQFSAGFLPAWFEARRRHALEQAERLPEPSRRMESWRFGTPGNESLEHVEAALPVAPEALAPIIREHASMPEA
LRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDTARKYLETETETLGSEKLSALTMALQHNGLVIMADREISLPLEIL
HFISGDNVAVFPSTLLIAETGSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMADDSA
EMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGASSNLLYANVLDDEASSIFSGMILV
AEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADRVQCSHGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLD
QFGDETIRTAVESIILP
>Mature_417_residues
MNHLLNEEQFSAGFLPAWFEARRRHALEQAERLPEPSRRMESWRFGTPGNESLEHVEAALPVAPEALAPIIREHASMPEA
LRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDTARKYLETETETLGSEKLSALTMALQHNGLVIMADREISLPLEIL
HFISGDNVAVFPSTLLIAETGSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMADDSA
EMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGASSNLLYANVLDDEASSIFSGMILV
AEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADRVQCSHGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLD
QFGDETIRTAVESIILP

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=389, Percent_Identity=27.2493573264781, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI87081955, Length=299, Percent_Identity=22.742474916388, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46052; Mature: 46052

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLNEEQFSAGFLPAWFEARRRHALEQAERLPEPSRRMESWRFGTPGNESLEHVEAAL
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHC
PVAPEALAPIIREHASMPEALRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDTARKY
CCCHHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHCCCCCEECHHHHHHCCCHHHHHH
LETETETLGSEKLSALTMALQHNGLVIMADREISLPLEILHFISGDNVAVFPSTLLIAET
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEEECC
GSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMADDSA
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGASSNL
HHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCE
LYANVLDDEASSIFSGMILVAEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADRVQCS
EEEEECCHHHHHHHHCEEEEECCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCC
HGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLDQFGDETIRTAVESIILP
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNHLLNEEQFSAGFLPAWFEARRRHALEQAERLPEPSRRMESWRFGTPGNESLEHVEAAL
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHC
PVAPEALAPIIREHASMPEALRIVYANGLPVSLPEELPEGLSVMDMEDFVLQCPDTARKY
CCCHHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHCCCCCEECHHHHHHCCCHHHHHH
LETETETLGSEKLSALTMALQHNGLVIMADREISLPLEILHFISGDNVAVFPSTLLIAET
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEEECC
GSRLHILERHLSADHGRQFCGALQQYHLSSASSVKYALVQELNSRSRAVELSHIMADDSA
CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EMEHLVSHPGAAWARQETVCILNGDGAGVRLLSANHLKENKELDQRTCQKHLYRGASSNL
HHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCE
LYANVLDDEASSIFSGMILVAEGAHDTSAYQSNRNLILSPRAEANSIPGLEILADRVQCS
EEEEECCHHHHHHHHCEEEEECCCCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCC
HGSATSSISPEEIFYLLSRGIPEQTARRMIAQGFLKHVLDQFGDETIRTAVESIILP
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]