| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734972
Identifier: 187734972
GI number: 187734972
Start: 551989
End: 553032
Strand: Direct
Name: 187734972
Synonym: Amuc_0465
Alternate gene names: NA
Gene position: 551989-553032 (Clockwise)
Preceding gene: 187734971
Following gene: 187734973
Centisome position: 20.72
GC content: 57.66
Gene sequence:
>1044_bases ATGCACGGCAAATCCTTTCCTCTCCTGACCGGCATCCTCCTGTTTCTTTGGGGCATGCCATTACTGATGGCGGATATTGT AGTGCGCTTCCCCACGGAAAATACAGCCCTGCTGGACAACCGCCCGCAGGACTTTTACATGTATGTAGACCGCAATTTTG AAGGGAAGAAATCCCAGCCGTGGGAAGCTGGAGCCTACGGCTTTACCCGGACCCTCGTCAGAACCCAGGCAGGCCCCGTG GCCGTCAAATTTCATGAGGGTATCGACATTAAACCTCTCAGGAGGGATGCTTCCGGCACGCCGCTGGACGACGTGCACCC CGTAGCCGGAGGCACGGTAGTCCATGCCTCCGCCAACCCAACCCATAGCAATTACGGCCGCTATGTGGTCATTGAGCACC AGCTGAAGGACGGCCCGCTTTACAGCCTGTATGCCCATCTGGCCTCCGTCTCCTGCAGGAAAGGCGACCGGGTAGGAACC GGAAACGTTATTGGAAAGCTGGGATACTCCGGGGTGGGTTTGAACAAAACGCGTGCTCATGTGCATCTGGAACTCTGCCT CAAGCTACAAGATGACTTTGAAAACTGGTATTCCAGTCTGAAACTGGGCACTCCCAACCGCCACGGTTCCTATAACGGAC TCAATTTGGCCGGCTTTGACCCGGCACCCGTCCTCCTGCAATGCAAGGACGGGGCGGAATTTTCCCTCTCTCGCCATATC TCCTCCCTGCCGGTCCAATACGTCGTGCGGGCTCCCTCTTCCGGCGAACTGCCCAGCCTTGTCAAACGCTACCCCTTCCT CCTGAAGCCGGGGCCCTCCGACCCCAAATCCTGGGAAATCAGTTTCACGGGAGAAGGAGTTCCCGTTTCCGTGACTCCTT CCAGCCAACCGTGCACGGAACCCGTCGTCATCCGGGCCGTTCCGCATCCTTTCTCCCAACTGTACAGGACCTGCAACCGC GTTTCCGGCTCCAGCAAGGACCCTAAGCTTACCGCCGCCGGCAAACGCTACATCCGGCTCATCTTCATGGGGCCTGAATC ATAA
Upstream 100 bases:
>100_bases TCAGGAAAAGAAGGAGGCCAAAGACCCTGAAGAACACAAAGACCGTACCGTGATCAGCACCCGCCGGGGGCGGATCTGAG CCAGCACCCCTCGTATCAGC
Downstream 100 bases:
>100_bases TCCTACGATGATGCAAACCTTTTCCAGATTCCGTTTTCCCCATGCCGTTCTCACATCCTGCGCGGCTGTCCTGCTTTCCC TGGGCGGCGCTTCCCCTGCA
Product: Peptidase M23
Products: NA
Alternate protein names: M23 Peptidase Domain Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MHGKSFPLLTGILLFLWGMPLLMADIVVRFPTENTALLDNRPQDFYMYVDRNFEGKKSQPWEAGAYGFTRTLVRTQAGPV AVKFHEGIDIKPLRRDASGTPLDDVHPVAGGTVVHASANPTHSNYGRYVVIEHQLKDGPLYSLYAHLASVSCRKGDRVGT GNVIGKLGYSGVGLNKTRAHVHLELCLKLQDDFENWYSSLKLGTPNRHGSYNGLNLAGFDPAPVLLQCKDGAEFSLSRHI SSLPVQYVVRAPSSGELPSLVKRYPFLLKPGPSDPKSWEISFTGEGVPVSVTPSSQPCTEPVVIRAVPHPFSQLYRTCNR VSGSSKDPKLTAAGKRYIRLIFMGPES
Sequences:
>Translated_347_residues MHGKSFPLLTGILLFLWGMPLLMADIVVRFPTENTALLDNRPQDFYMYVDRNFEGKKSQPWEAGAYGFTRTLVRTQAGPV AVKFHEGIDIKPLRRDASGTPLDDVHPVAGGTVVHASANPTHSNYGRYVVIEHQLKDGPLYSLYAHLASVSCRKGDRVGT GNVIGKLGYSGVGLNKTRAHVHLELCLKLQDDFENWYSSLKLGTPNRHGSYNGLNLAGFDPAPVLLQCKDGAEFSLSRHI SSLPVQYVVRAPSSGELPSLVKRYPFLLKPGPSDPKSWEISFTGEGVPVSVTPSSQPCTEPVVIRAVPHPFSQLYRTCNR VSGSSKDPKLTAAGKRYIRLIFMGPES >Mature_347_residues MHGKSFPLLTGILLFLWGMPLLMADIVVRFPTENTALLDNRPQDFYMYVDRNFEGKKSQPWEAGAYGFTRTLVRTQAGPV AVKFHEGIDIKPLRRDASGTPLDDVHPVAGGTVVHASANPTHSNYGRYVVIEHQLKDGPLYSLYAHLASVSCRKGDRVGT GNVIGKLGYSGVGLNKTRAHVHLELCLKLQDDFENWYSSLKLGTPNRHGSYNGLNLAGFDPAPVLLQCKDGAEFSLSRHI SSLPVQYVVRAPSSGELPSLVKRYPFLLKPGPSDPKSWEISFTGEGVPVSVTPSSQPCTEPVVIRAVPHPFSQLYRTCNR VSGSSKDPKLTAAGKRYIRLIFMGPES
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38100; Mature: 38100
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGKSFPLLTGILLFLWGMPLLMADIVVRFPTENTALLDNRPQDFYMYVDRNFEGKKSQP CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCEEEEEEECCCCCCCCCC WEAGAYGFTRTLVRTQAGPVAVKFHEGIDIKPLRRDASGTPLDDVHPVAGGTVVHASANP CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC THSNYGRYVVIEHQLKDGPLYSLYAHLASVSCRKGDRVGTGNVIGKLGYSGVGLNKTRAH CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCHHE VHLELCLKLQDDFENWYSSLKLGTPNRHGSYNGLNLAGFDPAPVLLQCKDGAEFSLSRHI EEEEEEEEEHHHHHHHHHHEECCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHH SSLPVQYVVRAPSSGELPSLVKRYPFLLKPGPSDPKSWEISFTGEGVPVSVTPSSQPCTE HHCCEEEEEECCCCCCCHHHHHHCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCC PVVIRAVPHPFSQLYRTCNRVSGSSKDPKLTAAGKRYIRLIFMGPES CEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCC >Mature Secondary Structure MHGKSFPLLTGILLFLWGMPLLMADIVVRFPTENTALLDNRPQDFYMYVDRNFEGKKSQP CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCEEEEEEECCCCCCCCCC WEAGAYGFTRTLVRTQAGPVAVKFHEGIDIKPLRRDASGTPLDDVHPVAGGTVVHASANP CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC THSNYGRYVVIEHQLKDGPLYSLYAHLASVSCRKGDRVGTGNVIGKLGYSGVGLNKTRAH CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCHHE VHLELCLKLQDDFENWYSSLKLGTPNRHGSYNGLNLAGFDPAPVLLQCKDGAEFSLSRHI EEEEEEEEEHHHHHHHHHHEECCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHH SSLPVQYVVRAPSSGELPSLVKRYPFLLKPGPSDPKSWEISFTGEGVPVSVTPSSQPCTE HHCCEEEEEECCCCCCCHHHHHHCCEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCC PVVIRAVPHPFSQLYRTCNRVSGSSKDPKLTAAGKRYIRLIFMGPES CEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA