| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734927
Identifier: 187734927
GI number: 187734927
Start: 502096
End: 503613
Strand: Reverse
Name: 187734927
Synonym: Amuc_0420
Alternate gene names: NA
Gene position: 503613-502096 (Counterclockwise)
Preceding gene: 187734937
Following gene: 187734926
Centisome position: 18.9
GC content: 54.55
Gene sequence:
>1518_bases ATGGTGAATTGCAGCAAATGCGGGCATGAGTTTCTTTGCGACAGGGAAAAACTGATTCCTAAGAAACCTTTTGCCAAAGC AAAGAAAGCCGTTTCCGTCCATTCCCCCAAAGACAGAAGGGAAGCCATTCAGAGCGCCCTGGTGGAAACGGGGCTGATCC AATTGGTGTGCCTTTGCGCGTCCCTGGCTGTTGCCGCCGGCTGCGTCTGGATTTTTTACAATGCTTCTTCCGAGATGGAT GGGACCTTTTTCCTTTCCATGCTGCAGCAGCCCCAGCAGAAGGCGTTTGCCCTGTTTTTTGCCTGTCTTGCCGGAGGCTT GATGGCCTGTGCCGGACGCAGGCACAAGATTGTTTTCATTTTGCTGGGTTTGCTGGTTGCAGGGGGGATTGCTTCCCTGC CTTTCGTGTATCCGGTCAAGGTGAATCCCTCCCTGCTCGGGGGGCATGAAGAGGGGAGTGTCAGGGAAGAAGATGTCTCC GGCTTTACCAGCATGGGGCTGGAGCAGCTGCCCTCCAAGAACGCTTCTGTCCAGAATTATGGGGCCGGTGATTTGAAACC TCTGTTTTCCGCTATTGACCGCAAGGAATCCCAGGGGGTTCTGGGCGTATGGGTGGTTGGGGTGAATGCAGCCAACCGGG ATATGGTAAAGGCGTATTTGAAGAGGATGACCCAGTCCGAGGACGAACCTATTTTTTATGACCGCAAGGGAACGGGCGGC GGGCTGTTCGTTATTACTCCCACTCCCATTACGTTTAAGGAATTTGTAGAGGTTGCGGGCAAGATGGGGAAGGTGTCCCT GCAGGATAAGGAGCGTTTTTTTGTGGAAGTGATTCTGAACCGGGACAGGTTTGAAGCGCGGCCCGCTTCCGCCGCGTTGC AGGATGAGCGCCACCAGTATTTCGTGCTGGCCAATTTGAAGGAGCTGTCCTGTCTGGACATCCGCCGCGTTATTGCCGCC GCAAAACGTTTGTCGGCTGTAAATCCGGATAAGATGCGGGGTGAGGTTTCTTCCAGGCTGGTGGAGCTTCTCCGGGAACC GTGGGGGCGTGATGCGGAATATGTGACCGCGTTGGCTTCGGCCCTTGTGGTATGGGCAGAACCGGATCATGAGGAGGCTC AGCGCGTGGTTGATTACGTGGCTACGGAGCTGAAGAAGGCGGATTGCGAAATCCCGGCGTCTCTGATCAGGTTTTTACTG CATGGTTCGGAAAAGAGAAGTTTGGCGTTGCTTCTGGAGGAATGGAAAAAGGATCCCCAGAAGTGGGAGGACGAATGCAA GGCTGCCGGCCCAACGGGAGAAGCTGATATCATCCGTTCGCTGAATGAGTCGGACGATTTTGTGTTGAAACGTTCCGCCG CCCGAATTCTTGGGGAAATCGGTTCGGAAGCTTCCCTGTCCGCGCTTAAGGCTTTCACTCATGACGCCGATAACGAATTG CGCCTGTGCGCGGAGTTGTCTGTGAACCTGATTGAAAAGCGGCTTGGGATAGATTCTTCCGCCAAAGGAGGCCGGTAA
Upstream 100 bases:
>100_bases ATTGCAAAAGAATGAAAAACGTGCATATTGGAGCCCGGTGAATCTGAATTGTCCACAGTGCAAACGACATATCAATGTGC CTTCTTCCGCGGAGGGCTCT
Downstream 100 bases:
>100_bases GGGCGGCTTCCGTTTCCGTGATGGCGCATCGCGCTGTTTTTCTGGCTTCAATACGGAAGGGGAGTTTTTTTCCCGGACGG TTTACGGGGATTGTTACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MVNCSKCGHEFLCDREKLIPKKPFAKAKKAVSVHSPKDRREAIQSALVETGLIQLVCLCASLAVAAGCVWIFYNASSEMD GTFFLSMLQQPQQKAFALFFACLAGGLMACAGRRHKIVFILLGLLVAGGIASLPFVYPVKVNPSLLGGHEEGSVREEDVS GFTSMGLEQLPSKNASVQNYGAGDLKPLFSAIDRKESQGVLGVWVVGVNAANRDMVKAYLKRMTQSEDEPIFYDRKGTGG GLFVITPTPITFKEFVEVAGKMGKVSLQDKERFFVEVILNRDRFEARPASAALQDERHQYFVLANLKELSCLDIRRVIAA AKRLSAVNPDKMRGEVSSRLVELLREPWGRDAEYVTALASALVVWAEPDHEEAQRVVDYVATELKKADCEIPASLIRFLL HGSEKRSLALLLEEWKKDPQKWEDECKAAGPTGEADIIRSLNESDDFVLKRSAARILGEIGSEASLSALKAFTHDADNEL RLCAELSVNLIEKRLGIDSSAKGGR
Sequences:
>Translated_505_residues MVNCSKCGHEFLCDREKLIPKKPFAKAKKAVSVHSPKDRREAIQSALVETGLIQLVCLCASLAVAAGCVWIFYNASSEMD GTFFLSMLQQPQQKAFALFFACLAGGLMACAGRRHKIVFILLGLLVAGGIASLPFVYPVKVNPSLLGGHEEGSVREEDVS GFTSMGLEQLPSKNASVQNYGAGDLKPLFSAIDRKESQGVLGVWVVGVNAANRDMVKAYLKRMTQSEDEPIFYDRKGTGG GLFVITPTPITFKEFVEVAGKMGKVSLQDKERFFVEVILNRDRFEARPASAALQDERHQYFVLANLKELSCLDIRRVIAA AKRLSAVNPDKMRGEVSSRLVELLREPWGRDAEYVTALASALVVWAEPDHEEAQRVVDYVATELKKADCEIPASLIRFLL HGSEKRSLALLLEEWKKDPQKWEDECKAAGPTGEADIIRSLNESDDFVLKRSAARILGEIGSEASLSALKAFTHDADNEL RLCAELSVNLIEKRLGIDSSAKGGR >Mature_505_residues MVNCSKCGHEFLCDREKLIPKKPFAKAKKAVSVHSPKDRREAIQSALVETGLIQLVCLCASLAVAAGCVWIFYNASSEMD GTFFLSMLQQPQQKAFALFFACLAGGLMACAGRRHKIVFILLGLLVAGGIASLPFVYPVKVNPSLLGGHEEGSVREEDVS GFTSMGLEQLPSKNASVQNYGAGDLKPLFSAIDRKESQGVLGVWVVGVNAANRDMVKAYLKRMTQSEDEPIFYDRKGTGG GLFVITPTPITFKEFVEVAGKMGKVSLQDKERFFVEVILNRDRFEARPASAALQDERHQYFVLANLKELSCLDIRRVIAA AKRLSAVNPDKMRGEVSSRLVELLREPWGRDAEYVTALASALVVWAEPDHEEAQRVVDYVATELKKADCEIPASLIRFLL HGSEKRSLALLLEEWKKDPQKWEDECKAAGPTGEADIIRSLNESDDFVLKRSAARILGEIGSEASLSALKAFTHDADNEL RLCAELSVNLIEKRLGIDSSAKGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55510; Mature: 55510
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNCSKCGHEFLCDREKLIPKKPFAKAKKAVSVHSPKDRREAIQSALVETGLIQLVCLCA CCCCHHCCHHHHCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAVAAGCVWIFYNASSEMDGTFFLSMLQQPQQKAFALFFACLAGGLMACAGRRHKIVFI HHHHHHCEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLGLLVAGGIASLPFVYPVKVNPSLLGGHEEGSVREEDVSGFTSMGLEQLPSKNASVQNY HHHHHHHCCHHHCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCC GAGDLKPLFSAIDRKESQGVLGVWVVGVNAANRDMVKAYLKRMTQSEDEPIFYDRKGTGG CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC GLFVITPTPITFKEFVEVAGKMGKVSLQDKERFFVEVILNRDRFEARPASAALQDERHQY CEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHCCCCE FVLANLKELSCLDIRRVIAAAKRLSAVNPDKMRGEVSSRLVELLREPWGRDAEYVTALAS EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALVVWAEPDHEEAQRVVDYVATELKKADCEIPASLIRFLLHGSEKRSLALLLEEWKKDPQ HHEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHH KWEDECKAAGPTGEADIIRSLNESDDFVLKRSAARILGEIGSEASLSALKAFTHDADNEL HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHH RLCAELSVNLIEKRLGIDSSAKGGR HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVNCSKCGHEFLCDREKLIPKKPFAKAKKAVSVHSPKDRREAIQSALVETGLIQLVCLCA CCCCHHCCHHHHCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAVAAGCVWIFYNASSEMDGTFFLSMLQQPQQKAFALFFACLAGGLMACAGRRHKIVFI HHHHHHCEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLGLLVAGGIASLPFVYPVKVNPSLLGGHEEGSVREEDVSGFTSMGLEQLPSKNASVQNY HHHHHHHCCHHHCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHCHHHCCCCCCCCCCC GAGDLKPLFSAIDRKESQGVLGVWVVGVNAANRDMVKAYLKRMTQSEDEPIFYDRKGTGG CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCC GLFVITPTPITFKEFVEVAGKMGKVSLQDKERFFVEVILNRDRFEARPASAALQDERHQY CEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHCCCCE FVLANLKELSCLDIRRVIAAAKRLSAVNPDKMRGEVSSRLVELLREPWGRDAEYVTALAS EEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALVVWAEPDHEEAQRVVDYVATELKKADCEIPASLIRFLLHGSEKRSLALLLEEWKKDPQ HHEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHH KWEDECKAAGPTGEADIIRSLNESDDFVLKRSAARILGEIGSEASLSALKAFTHDADNEL HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHH RLCAELSVNLIEKRLGIDSSAKGGR HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA