| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is ybbP [H]
Identifier: 187734908
GI number: 187734908
Start: 482483
End: 483358
Strand: Reverse
Name: ybbP [H]
Synonym: Amuc_0400
Alternate gene names: 187734908
Gene position: 483358-482483 (Counterclockwise)
Preceding gene: 187734910
Following gene: 187734907
Centisome position: 18.14
GC content: 57.31
Gene sequence:
>876_bases ATGAACGGTAAATTCCCGGAGCCTGCCGGCAACGCGAGAGGATCGGTATTGCATTCGGCCGGGTTGTTGTGTAGCCTGTT GGGCATGTGGGACTGGATTGTGATCAAGGATGCGCTCCGGGCGGTTGTTGAAATTTTCATCCTGTGGGTGTTCCTGTACC AGATTTACCGTGCTTTCCACGCAACGCGCGGCGCGCGCATCATGGTGGGGCTGTTCGCCTGCTTTCTGGCCCTGGTGGTG CTGGCCTTTTTCTTTCAGCTGAATGTTATTTCGTGGATACTGACGCGCATTTTCGCCCCCGGCCTGGCGCTGGCTCTGGT GGTGATTTTCCAGCCGGAGCTGCGCGTGGGGCTGGCAAAGCTGGGAAGCCACCCGTTTTTTTCTTCCTTCGCCAAGCTTC AGCGGGTGGATTTCCTGGATAATTTCTGCAAGGCGGTAAGCAAGCTTTCCAACCAGCGGTTCGGCGCCCTGTTCGCTTTT GAGAGGAGCATCAGCATGAAGCCTATTGAGGATTCCGGCGTGAAGCTGGACGCCATTTTTTCTCCGGAACTGGCCCTGAC GATTTTCCATACCAAGACGGCTCTCCACGATGGGGGCGTGGTGATTTCCGGCGACCGCATTTCTGCGGCTGCCTGCGTGT TCCCTGTTTCCCAGAAGGAAATGAGCGACCGTACCTTGGGGCTGCGCCACCGCGCGGGCGTGGGCATGTCCGAGGAGAGC GACTGCGTGGTGGTGGTGGTGTCCGAGGAGACGGGGGCTATCGCGTTGGCCGTAGGCGGGAAGCTGGAACGCAACCTGAC TCCGGAACAGTTGAAGGGACGCCTTGAAGAGCTGCTGAATATTTCTTCTTCCAATGAAAAAACTGCTATTGCTTAA
Upstream 100 bases:
>100_bases TTTATTGTTATTATTTATTTTCCAAAGAACTGCTCTTCTTTTTAAGAACTTCTATCTGTCTCCGGAACGTACAGAGATGT CTTCAAATTCGGGAACTGAG
Downstream 100 bases:
>100_bases TTGGCCTGCCAAGTTGTTCTGTCTGGTGTTGGCCGTGATTATCTGGTCTTTCATCAATCACTGGGTGACCACGAATGACG GCGTGCCTTCCCGCGGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA
Sequences:
>Translated_291_residues MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA >Mature_291_residues MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 31805; Mature: 31805
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRGARIMVGLFACFLALVVLAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH LGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAFERSISMKPIEDSGVKLDAIF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCEEEEEE SPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES CCCEEEEEEEHHHHCCCCCEEEECCCCCHHHEEECCCHHHHHHHHHCHHHHCCCCCCCCC DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA CEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRGARIMVGLFACFLALVVLAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH LGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAFERSISMKPIEDSGVKLDAIF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCEEEEEE SPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES CCCEEEEEEEHHHHCCCCCEEEECCCCCHHHEEECCCHHHHHHHHHCHHHHCCCCCCCCC DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA CEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]