Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is ybbP [H]

Identifier: 187734908

GI number: 187734908

Start: 482483

End: 483358

Strand: Reverse

Name: ybbP [H]

Synonym: Amuc_0400

Alternate gene names: 187734908

Gene position: 483358-482483 (Counterclockwise)

Preceding gene: 187734910

Following gene: 187734907

Centisome position: 18.14

GC content: 57.31

Gene sequence:

>876_bases
ATGAACGGTAAATTCCCGGAGCCTGCCGGCAACGCGAGAGGATCGGTATTGCATTCGGCCGGGTTGTTGTGTAGCCTGTT
GGGCATGTGGGACTGGATTGTGATCAAGGATGCGCTCCGGGCGGTTGTTGAAATTTTCATCCTGTGGGTGTTCCTGTACC
AGATTTACCGTGCTTTCCACGCAACGCGCGGCGCGCGCATCATGGTGGGGCTGTTCGCCTGCTTTCTGGCCCTGGTGGTG
CTGGCCTTTTTCTTTCAGCTGAATGTTATTTCGTGGATACTGACGCGCATTTTCGCCCCCGGCCTGGCGCTGGCTCTGGT
GGTGATTTTCCAGCCGGAGCTGCGCGTGGGGCTGGCAAAGCTGGGAAGCCACCCGTTTTTTTCTTCCTTCGCCAAGCTTC
AGCGGGTGGATTTCCTGGATAATTTCTGCAAGGCGGTAAGCAAGCTTTCCAACCAGCGGTTCGGCGCCCTGTTCGCTTTT
GAGAGGAGCATCAGCATGAAGCCTATTGAGGATTCCGGCGTGAAGCTGGACGCCATTTTTTCTCCGGAACTGGCCCTGAC
GATTTTCCATACCAAGACGGCTCTCCACGATGGGGGCGTGGTGATTTCCGGCGACCGCATTTCTGCGGCTGCCTGCGTGT
TCCCTGTTTCCCAGAAGGAAATGAGCGACCGTACCTTGGGGCTGCGCCACCGCGCGGGCGTGGGCATGTCCGAGGAGAGC
GACTGCGTGGTGGTGGTGGTGTCCGAGGAGACGGGGGCTATCGCGTTGGCCGTAGGCGGGAAGCTGGAACGCAACCTGAC
TCCGGAACAGTTGAAGGGACGCCTTGAAGAGCTGCTGAATATTTCTTCTTCCAATGAAAAAACTGCTATTGCTTAA

Upstream 100 bases:

>100_bases
TTTATTGTTATTATTTATTTTCCAAAGAACTGCTCTTCTTTTTAAGAACTTCTATCTGTCTCCGGAACGTACAGAGATGT
CTTCAAATTCGGGAACTGAG

Downstream 100 bases:

>100_bases
TTGGCCTGCCAAGTTGTTCTGTCTGGTGTTGGCCGTGATTATCTGGTCTTTCATCAATCACTGGGTGACCACGAATGACG
GCGTGCCTTCCCGCGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV
LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF
ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES
DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA

Sequences:

>Translated_291_residues
MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV
LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF
ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES
DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA
>Mature_291_residues
MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFHATRGARIMVGLFACFLALVV
LAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAKLGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAF
ERSISMKPIEDSGVKLDAIFSPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES
DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 31805; Mature: 31805

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRGARIMVGLFACFLALVVLAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
LGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAFERSISMKPIEDSGVKLDAIF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCEEEEEE
SPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES
CCCEEEEEEEHHHHCCCCCEEEECCCCCHHHEEECCCHHHHHHHHHCHHHHCCCCCCCCC
DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA
CEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNGKFPEPAGNARGSVLHSAGLLCSLLGMWDWIVIKDALRAVVEIFILWVFLYQIYRAFH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRGARIMVGLFACFLALVVLAFFFQLNVISWILTRIFAPGLALALVVIFQPELRVGLAK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
LGSHPFFSSFAKLQRVDFLDNFCKAVSKLSNQRFGALFAFERSISMKPIEDSGVKLDAIF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCEEEEEE
SPELALTIFHTKTALHDGGVVISGDRISAAACVFPVSQKEMSDRTLGLRHRAGVGMSEES
CCCEEEEEEEHHHHCCCCCEEEECCCCCHHHEEECCCHHHHHHHHHCHHHHCCCCCCCCC
DCVVVVVSEETGAIALAVGGKLERNLTPEQLKGRLEELLNISSSNEKTAIA
CEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]