| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734901
Identifier: 187734901
GI number: 187734901
Start: 475589
End: 475981
Strand: Direct
Name: 187734901
Synonym: Amuc_0393
Alternate gene names: NA
Gene position: 475589-475981 (Clockwise)
Preceding gene: 187734900
Following gene: 187734904
Centisome position: 17.85
GC content: 53.18
Gene sequence:
>393_bases ATGCCTTTTTTGCGGCACGAACCCATTTGCAAAACAGGCTCCGGCAGACAAACCGGCATCAAGGAAAACGGGAAAGGACA GGCCAGAATTCCGTCCAACTCCCCCTGCAGCGCTTCAATAGGCTGGGAATGTCCCGTATATCGCCGCAACGGCCAAAAGT CCAAAGGGACGGCTCCTGCATGGCTGCCTTTTTCAGCCACCGCCGGTATGCGGAACATATTGAAATCGGAAAAAGCCCTG CAACCCATGCCAACGGCAGAACCCCGGGAAAAACGCCTACCGACTGAAATCAGCCACGATATCATCTCCGGAAGGCTTCT GTTCCATTTCCTGTTTGTACGAACAATCTTCTCCCTGCCGTCGGAAAACCTGGCGCTTTTCCTTACATCGTAA
Upstream 100 bases:
>100_bases GCGCTTCCGCTGCGGAAATAAACGTTTTCGGCACTCCCGCAGGCAAATAAAAACTTCCCTGACTTTTCTCACCAGGGCAT TCCGGTTTTTTACGGCCGGA
Downstream 100 bases:
>100_bases AATCTATTTTAAGCAAACAACGGGAAGACCCGGTCAACTCAGCGAGGGATTTCCGCAAAACAGAAGCTTTCCTTTTCAAA AATCAGGTATGAAAAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPFLRHEPICKTGSGRQTGIKENGKGQARIPSNSPCSASIGWECPVYRRNGQKSKGTAPAWLPFSATAGMRNILKSEKAL QPMPTAEPREKRLPTEISHDIISGRLLFHFLFVRTIFSLPSENLALFLTS
Sequences:
>Translated_130_residues MPFLRHEPICKTGSGRQTGIKENGKGQARIPSNSPCSASIGWECPVYRRNGQKSKGTAPAWLPFSATAGMRNILKSEKAL QPMPTAEPREKRLPTEISHDIISGRLLFHFLFVRTIFSLPSENLALFLTS >Mature_129_residues PFLRHEPICKTGSGRQTGIKENGKGQARIPSNSPCSASIGWECPVYRRNGQKSKGTAPAWLPFSATAGMRNILKSEKALQ PMPTAEPREKRLPTEISHDIISGRLLFHFLFVRTIFSLPSENLALFLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14408; Mature: 14277
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLRHEPICKTGSGRQTGIKENGKGQARIPSNSPCSASIGWECPVYRRNGQKSKGTAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WLPFSATAGMRNILKSEKALQPMPTAEPREKRLPTEISHDIISGRLLFHFLFVRTIFSLP ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SENLALFLTS CCCEEEEEEC >Mature Secondary Structure PFLRHEPICKTGSGRQTGIKENGKGQARIPSNSPCSASIGWECPVYRRNGQKSKGTAPA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WLPFSATAGMRNILKSEKALQPMPTAEPREKRLPTEISHDIISGRLLFHFLFVRTIFSLP ECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SENLALFLTS CCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA