| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734867
Identifier: 187734867
GI number: 187734867
Start: 422330
End: 423436
Strand: Reverse
Name: 187734867
Synonym: Amuc_0359
Alternate gene names: NA
Gene position: 423436-422330 (Counterclockwise)
Preceding gene: 187734868
Following gene: 187734866
Centisome position: 15.89
GC content: 54.2
Gene sequence:
>1107_bases ATGACGGGGCTTTGCTGCCGTGAAACGGGGGGGGCAGGCCTGTTTGAAATTATGGTCGGAAGGGCAAAGAAATGTCTTTG GGGCATCTGGCTGTGCTCGGGGCTGGCTCTTTGTGTCTGGAATGCGGAATCGGCCGGCGGGGGGGCTGATATGGCGGCAT CGAAAGATGCCTGTTTCATCAAGACTTTCCGCGCCAAGATCGTCCCGGAAAGGCTGCGCTCCTTTGTCATGCCGGCCGAT GGAGTTGTCAGCAACTGGATTCCTGCGGACGGGCGCGTTCAGAAGGATACCATTATTGCAACGGTCAATGAAGATGAAAT TGAGCTGGAGCGCAAGGAGCTGGAGGTCAAAATCCTGAAGGACCGCATCGCCAAGGAGGAAGAGTTGTCAAAGCTGGAAA AACAGCTTGAAGAGATAGAATTCTACTCTTCCCTGTCGAGGGAGGAACGGCAATATGCCAGCAAGCGGGCGGAAGGCGGG GAAAGGGCCATCCGGGCTTTGAAAGACAAGATTGAGCTTTCCAAAAGGGAGTTGTCCCTGGTGGAGGACAAGCCGCGTCT GGATTTTCGCAAGAAGGAGGAAAAATATATCCTCAGAATGCCTTTTGACGGGAAGCTGCAGTACCAGTTTTCCATTCCGC CGGATAACAGCGTAGCCCTTTACATGGACGCCGCGTCCCCGATTGCGACCGTGTGCGATGACTCCTCTTATTATCTGACC ATTTCCATTTCGGACCCTGATTTGACGAATCTGCCGCCGGAATCCCTTTCCCTGTCCGTCCCTCTGGGCGACGGTTCCGC CCTGAAGGGGGTTTTTGCCTTCAAGCGGGTGGAGAAGAATGTTTCCGGAGGCGGGGAATTGCTGGCGTATTTTTTCCGTT TGCCCCGTCAGGAGCATGCACGCGCCCATTCCATGCTGGGTTCCAACTGCACGGCCCGTCTTTATTACATGCCGCAGGGA GAAGTGTTTCATCTCAACAAGGTGAGGCTGGCTTCCCTGCCGGAGGGAAAAAAATGTTCGTCCTGGCAGGAACTTCTGGA AAAAGTGCATCCGGACCTGGAGCTGGTGGTGAATGGGGAAACGGAATTGATTGTTCGAAAAAAATGA
Upstream 100 bases:
>100_bases CAGGTTCCCGTTGAGAATGATGAAGGCGAGGTTGAAGCGCAGGACTGGACCGCTACGGAAGGAACGGTGAGTTACACGGT ATCCTGAGTTCTGATCATTT
Downstream 100 bases:
>100_bases AATTGCTGTGCGAATCAGTCTGTTTCAGTTATTCAGGCAAGCAGTGGATTTTTGAAAATTACAACAGGGTGTTCACTTCC GGAATCACCATTTTGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTGLCCRETGGAGLFEIMVGRAKKCLWGIWLCSGLALCVWNAESAGGGADMAASKDACFIKTFRAKIVPERLRSFVMPAD GVVSNWIPADGRVQKDTIIATVNEDEIELERKELEVKILKDRIAKEEELSKLEKQLEEIEFYSSLSREERQYASKRAEGG ERAIRALKDKIELSKRELSLVEDKPRLDFRKKEEKYILRMPFDGKLQYQFSIPPDNSVALYMDAASPIATVCDDSSYYLT ISISDPDLTNLPPESLSLSVPLGDGSALKGVFAFKRVEKNVSGGGELLAYFFRLPRQEHARAHSMLGSNCTARLYYMPQG EVFHLNKVRLASLPEGKKCSSWQELLEKVHPDLELVVNGETELIVRKK
Sequences:
>Translated_368_residues MTGLCCRETGGAGLFEIMVGRAKKCLWGIWLCSGLALCVWNAESAGGGADMAASKDACFIKTFRAKIVPERLRSFVMPAD GVVSNWIPADGRVQKDTIIATVNEDEIELERKELEVKILKDRIAKEEELSKLEKQLEEIEFYSSLSREERQYASKRAEGG ERAIRALKDKIELSKRELSLVEDKPRLDFRKKEEKYILRMPFDGKLQYQFSIPPDNSVALYMDAASPIATVCDDSSYYLT ISISDPDLTNLPPESLSLSVPLGDGSALKGVFAFKRVEKNVSGGGELLAYFFRLPRQEHARAHSMLGSNCTARLYYMPQG EVFHLNKVRLASLPEGKKCSSWQELLEKVHPDLELVVNGETELIVRKK >Mature_367_residues TGLCCRETGGAGLFEIMVGRAKKCLWGIWLCSGLALCVWNAESAGGGADMAASKDACFIKTFRAKIVPERLRSFVMPADG VVSNWIPADGRVQKDTIIATVNEDEIELERKELEVKILKDRIAKEEELSKLEKQLEEIEFYSSLSREERQYASKRAEGGE RAIRALKDKIELSKRELSLVEDKPRLDFRKKEEKYILRMPFDGKLQYQFSIPPDNSVALYMDAASPIATVCDDSSYYLTI SISDPDLTNLPPESLSLSVPLGDGSALKGVFAFKRVEKNVSGGGELLAYFFRLPRQEHARAHSMLGSNCTARLYYMPQGE VFHLNKVRLASLPEGKKCSSWQELLEKVHPDLELVVNGETELIVRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41292; Mature: 41161
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLCCRETGGAGLFEIMVGRAKKCLWGIWLCSGLALCVWNAESAGGGADMAASKDACFI CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHH KTFRAKIVPERLRSFVMPADGVVSNWIPADGRVQKDTIIATVNEDEIELERKELEVKILK HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCEEEEEECCCHHHHHHHHHHHHHHH DRIAKEEELSKLEKQLEEIEFYSSLSREERQYASKRAEGGERAIRALKDKIELSKRELSL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VEDKPRLDFRKKEEKYILRMPFDGKLQYQFSIPPDNSVALYMDAASPIATVCDDSSYYLT HCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCHHHHCCCCCEEEE ISISDPDLTNLPPESLSLSVPLGDGSALKGVFAFKRVEKNVSGGGELLAYFFRLPRQEHA EEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH RAHSMLGSNCTARLYYMPQGEVFHLNKVRLASLPEGKKCSSWQELLEKVHPDLELVVNGE HHHHHHCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCC TELIVRKK EEEEEECC >Mature Secondary Structure TGLCCRETGGAGLFEIMVGRAKKCLWGIWLCSGLALCVWNAESAGGGADMAASKDACFI CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHH KTFRAKIVPERLRSFVMPADGVVSNWIPADGRVQKDTIIATVNEDEIELERKELEVKILK HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCEEEEEECCCHHHHHHHHHHHHHHH DRIAKEEELSKLEKQLEEIEFYSSLSREERQYASKRAEGGERAIRALKDKIELSKRELSL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VEDKPRLDFRKKEEKYILRMPFDGKLQYQFSIPPDNSVALYMDAASPIATVCDDSSYYLT HCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCHHHHCCCCCEEEE ISISDPDLTNLPPESLSLSVPLGDGSALKGVFAFKRVEKNVSGGGELLAYFFRLPRQEHA EEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH RAHSMLGSNCTARLYYMPQGEVFHLNKVRLASLPEGKKCSSWQELLEKVHPDLELVVNGE HHHHHHCCCCEEEEEECCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCC TELIVRKK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA