| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734850
Identifier: 187734850
GI number: 187734850
Start: 402996
End: 403403
Strand: Reverse
Name: 187734850
Synonym: Amuc_0342
Alternate gene names: NA
Gene position: 403403-402996 (Counterclockwise)
Preceding gene: 187734852
Following gene: 187734849
Centisome position: 15.14
GC content: 56.37
Gene sequence:
>408_bases ATGGTAAAAACTAAAACGACGTACGAGGGCGGCCTCCATTGTTCCATGGTTCATGAACCTTCCGGGGCCACGCTTTCCAC GGATGCCCCCGTGGACAACAACGGCAAGGGCGAGTCCTTTTCCCCCACGGACCTGGTAGGAGCGGCGCTTGCCGGCTGCA TGAGCACGATCATGGGTATTGTTGCCGAACGTAAGGGGATTAATCTGGAAGGCATGACGGTGGAAGTGGCCAAACACATG AATGCGGATCCCCGCCGTATCGGCAAGCTGGAAGTCGTCATTACCGTTCCTCTTCCGTCCGATTATCCGGACAGGAAGCT GCTGGAACAGGCTGCTCTGAGCTGCCCGGTCAAGCACAGCCTGCACCCTGATATTGAAATACCCATTACCTGGAAGTGGG TTGGCTGA
Upstream 100 bases:
>100_bases CTTTCAAAAAGTTTCTCATAGCAAAGGCGGTTACCATAAAGAACGGGGGGATTCAATGTTTGTGTGTTGCATGGCGGGGA GCCTTGTATAAAATAAGGCC
Downstream 100 bases:
>100_bases CCGCTTCCGTGTTTTCTTGAGACCGCCTGTGAAAACAGGCGGTTTTTTTTGTGATGTTAAAAAATGTTGGAAAAATGCAA TAATAGTTGAGTATACTTGA
Product: OsmC family protein
Products: NA
Alternate protein names: Redox Protein; Stress-Induced Protein OsmC; OsmC/Ohr Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Osmc Family Protein; OsmC-Like Protein; Osmc-Like Protein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MVKTKTTYEGGLHCSMVHEPSGATLSTDAPVDNNGKGESFSPTDLVGAALAGCMSTIMGIVAERKGINLEGMTVEVAKHM NADPRRIGKLEVVITVPLPSDYPDRKLLEQAALSCPVKHSLHPDIEIPITWKWVG
Sequences:
>Translated_135_residues MVKTKTTYEGGLHCSMVHEPSGATLSTDAPVDNNGKGESFSPTDLVGAALAGCMSTIMGIVAERKGINLEGMTVEVAKHM NADPRRIGKLEVVITVPLPSDYPDRKLLEQAALSCPVKHSLHPDIEIPITWKWVG >Mature_135_residues MVKTKTTYEGGLHCSMVHEPSGATLSTDAPVDNNGKGESFSPTDLVGAALAGCMSTIMGIVAERKGINLEGMTVEVAKHM NADPRRIGKLEVVITVPLPSDYPDRKLLEQAALSCPVKHSLHPDIEIPITWKWVG
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14478; Mature: 14478
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTKTTYEGGLHCSMVHEPSGATLSTDAPVDNNGKGESFSPTDLVGAALAGCMSTIMGI CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAERKGINLEGMTVEVAKHMNADPRRIGKLEVVITVPLPSDYPDRKLLEQAALSCPVKHS HHHCCCCCCCCCEEEEHHHCCCCCHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCC LHPDIEIPITWKWVG CCCCEECEEEEEECC >Mature Secondary Structure MVKTKTTYEGGLHCSMVHEPSGATLSTDAPVDNNGKGESFSPTDLVGAALAGCMSTIMGI CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VAERKGINLEGMTVEVAKHMNADPRRIGKLEVVITVPLPSDYPDRKLLEQAALSCPVKHS HHHCCCCCCCCCEEEEHHHCCCCCHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCC LHPDIEIPITWKWVG CCCCEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA