| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734796
Identifier: 187734796
GI number: 187734796
Start: 343177
End: 343941
Strand: Reverse
Name: 187734796
Synonym: Amuc_0285
Alternate gene names: NA
Gene position: 343941-343177 (Counterclockwise)
Preceding gene: 187734797
Following gene: 187734791
Centisome position: 12.91
GC content: 56.21
Gene sequence:
>765_bases ATGAAGCTGAATAAAAAGAGCCGGGATAAAATTTTCGACCTTCATTTGGGATTGACGTTTGACTGGAGGGAAACCGGCCT GTTGCGCTGGCGTATTTTTCTGTGGATGCTTTTTTTTGGCGTTTGCGCTTTTGCCGCCGGCCTTTTTGTCCATGTGGAGG TGCCGGAAATCCGCAGCAGGGGAGATCAGCCGGGTGCCGTGGTGCTGCTGCCTGCAGATAATCCGCGCCTGCATCAGTAT GTGCTGCGCAATACTCCTCTGCCTGTGAGAGGCCCCGTTTGGGCTGATCCGGTGACGGCCGGCCCGACCGGGGAAATGGG TGTGACTTTGCCTTCTCCGCGTTCCGCAGATACGCCTCTGGCCCCTCTCCCCCCCGTGTCCGTGCCCACTGTGGCGGATC AGGTCTGGCGTATGTGGCAGCATCCGGATTTTCATATACGCGCCATGATGAATCCTTCCTTGGAGATTTCCGGAACATGC ATTCCCTATTTGTCTTTTTGTTCCCCGGGGCTGGATGGACGGATTGTTACAGCCGGCTCCCTGTCCGGTTTTTCCAGAAG TGAAGATCACACGGGGCTGAGGAGTGATTTTTTTGTGGTGGTGGATGTATGGGGCGTTCCTTCTCAAGTTTTGTTACTGG AGTCTTCCGGAAGTAATGGAGCGGATGAGTCCGCAATGAGGTTCGCCCGGTCTTTGCGCTGGGTTCCGTCCCGGGAGCCG CGGAGCGGCACCATGTCCATCGAATGGAAGGAGGAAGAGCCGTGA
Upstream 100 bases:
>100_bases CGGGCCCTGGAACAGCAGCTGGTGGATATGGTGCTTGCCAAGGGGATGACGTGTTATATTGCCGCCGAGCCCGCGGATTG ATTTTTTCCCTTGTTACCTC
Downstream 100 bases:
>100_bases ATATGACCCTCCAAGATTTTTTGATGCGCCTGTTTTTACTGGGCGCCGGCGGTTTTTGCGCTGTGGTGTCTGTTTGCCTG GCTGTGGGATGGATACGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKLNKKSRDKIFDLHLGLTFDWRETGLLRWRIFLWMLFFGVCAFAAGLFVHVEVPEIRSRGDQPGAVVLLPADNPRLHQY VLRNTPLPVRGPVWADPVTAGPTGEMGVTLPSPRSADTPLAPLPPVSVPTVADQVWRMWQHPDFHIRAMMNPSLEISGTC IPYLSFCSPGLDGRIVTAGSLSGFSRSEDHTGLRSDFFVVVDVWGVPSQVLLLESSGSNGADESAMRFARSLRWVPSREP RSGTMSIEWKEEEP
Sequences:
>Translated_254_residues MKLNKKSRDKIFDLHLGLTFDWRETGLLRWRIFLWMLFFGVCAFAAGLFVHVEVPEIRSRGDQPGAVVLLPADNPRLHQY VLRNTPLPVRGPVWADPVTAGPTGEMGVTLPSPRSADTPLAPLPPVSVPTVADQVWRMWQHPDFHIRAMMNPSLEISGTC IPYLSFCSPGLDGRIVTAGSLSGFSRSEDHTGLRSDFFVVVDVWGVPSQVLLLESSGSNGADESAMRFARSLRWVPSREP RSGTMSIEWKEEEP >Mature_254_residues MKLNKKSRDKIFDLHLGLTFDWRETGLLRWRIFLWMLFFGVCAFAAGLFVHVEVPEIRSRGDQPGAVVLLPADNPRLHQY VLRNTPLPVRGPVWADPVTAGPTGEMGVTLPSPRSADTPLAPLPPVSVPTVADQVWRMWQHPDFHIRAMMNPSLEISGTC IPYLSFCSPGLDGRIVTAGSLSGFSRSEDHTGLRSDFFVVVDVWGVPSQVLLLESSGSNGADESAMRFARSLRWVPSREP RSGTMSIEWKEEEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28263; Mature: 28263
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKKSRDKIFDLHLGLTFDWRETGLLRWRIFLWMLFFGVCAFAAGLFVHVEVPEIRSR CCCCCCCCCCEEEEEECEEECHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCC GDQPGAVVLLPADNPRLHQYVLRNTPLPVRGPVWADPVTAGPTGEMGVTLPSPRSADTPL CCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC APLPPVSVPTVADQVWRMWQHPDFHIRAMMNPSLEISGTCIPYLSFCSPGLDGRIVTAGS CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHHHHHCCCCCCCEEEEECC LSGFSRSEDHTGLRSDFFVVVDVWGVPSQVLLLESSGSNGADESAMRFARSLRWVPSREP CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC RSGTMSIEWKEEEP CCCEEEEEECCCCC >Mature Secondary Structure MKLNKKSRDKIFDLHLGLTFDWRETGLLRWRIFLWMLFFGVCAFAAGLFVHVEVPEIRSR CCCCCCCCCCEEEEEECEEECHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCC GDQPGAVVLLPADNPRLHQYVLRNTPLPVRGPVWADPVTAGPTGEMGVTLPSPRSADTPL CCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC APLPPVSVPTVADQVWRMWQHPDFHIRAMMNPSLEISGTCIPYLSFCSPGLDGRIVTAGS CCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEECCCHHHHHHHCCCCCCCEEEEECC LSGFSRSEDHTGLRSDFFVVVDVWGVPSQVLLLESSGSNGADESAMRFARSLRWVPSREP CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC RSGTMSIEWKEEEP CCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA