Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734789

Identifier: 187734789

GI number: 187734789

Start: 338507

End: 339229

Strand: Reverse

Name: 187734789

Synonym: Amuc_0278

Alternate gene names: NA

Gene position: 339229-338507 (Counterclockwise)

Preceding gene: 187734791

Following gene: 187734788

Centisome position: 12.73

GC content: 53.53

Gene sequence:

>723_bases
ATGAGCAGGCAGGCATTTTATCCGCATCTCTCAGTGGATTGTGTGTTGATCGGGTTCGATGAAGAAGGTTTGAAAGTTCT
TCTGGTTGAGAAGACGCAATTTGAACCCGGCCATACCGGCACCATTTCCAAATTGCCCGGCGATTTGATTTATGAGGAGG
AAGAACTGGATGCTGCTGCCCGCCGCGTTTTGTTTGACATGACCGGCATGTCTTCCCCCCATTTGGAACAGTTCCATACC
TTCGGTGCGCCATCGCGCATCAAGAATCCGGAGGACAGGGCATGGGTGGAGGCTGTTTCCGGCCAGAAGATAGGACGCCT
GGTGACGGTGGCCTACATGGCCATGCTCAGGATTTCCACCAAGCTGCGCAAACTGATGGAAAGCCACAAGACCCGCTGGG
TTCCTGTAGATGATTTGCCGGAACTGGCGTTTGATCACCGGGATATTATTGACCTGGCGCTGGAGAGAGTGCGTTCTTCC
GTGAAGAAGGAGCCTGCGCTGATTTATGACATGCTGCCTGCCAAGTTTACGGCTCTTCAGCTCCGGCGGCTGAATGAGGA
GATTCACGGCAAGCCCATGGATGTGCGTAATTTCCACAAAAAGATCGCTTCCCGCCCCTACATTGTGCCGCTGGATGAGA
AGGAGGAGGGGGTTCCCCACCGCGCCGCGCGCTATTACCGTTTTGACCGTAAAATTTATAATCGCCTTTATTGCCGGAGC
TGA

Upstream 100 bases:

>100_bases
TTTTCATTGCCGTTTCTATTTTGATTTTGGTTGACTTGGCTGGTTCGCTTGCGTAGCGTTGGTGCGATTCTGGGAACTTA
CTACAATAATAGATAACATA

Downstream 100 bases:

>100_bases
CGGTTCCGGGCCGTTCTGGCTTATTTTTTCCGTTTTTCCGGGCCTCTTCCCGCCATGCTTGCGGGGAGAGGGTCTTCTCG
TTTGACAGAGTCCGTTTTGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: DNA Hydrolase; NUDIX Family Hydrolase; Nudix Hydrolase; ADP-Ribose Pyrophosphatase; Hydrolase NUDIX Family; MutT/Nudix Family Protein; Hydrolase NUDIX Family Protein; Hydrolase; DNA Hydrolase With MutT Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; MutT/Nudix Family DNA Hydrolase; Nudix Hydrolase Family Protein; NTP Pyrophosphohydrolase; NUDIX Domain-Containing Protein; Hydrolase Nudix Family; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRQAFYPHLSVDCVLIGFDEEGLKVLLVEKTQFEPGHTGTISKLPGDLIYEEEELDAAARRVLFDMTGMSSPHLEQFHT
FGAPSRIKNPEDRAWVEAVSGQKIGRLVTVAYMAMLRISTKLRKLMESHKTRWVPVDDLPELAFDHRDIIDLALERVRSS
VKKEPALIYDMLPAKFTALQLRRLNEEIHGKPMDVRNFHKKIASRPYIVPLDEKEEGVPHRAARYYRFDRKIYNRLYCRS

Sequences:

>Translated_240_residues
MSRQAFYPHLSVDCVLIGFDEEGLKVLLVEKTQFEPGHTGTISKLPGDLIYEEEELDAAARRVLFDMTGMSSPHLEQFHT
FGAPSRIKNPEDRAWVEAVSGQKIGRLVTVAYMAMLRISTKLRKLMESHKTRWVPVDDLPELAFDHRDIIDLALERVRSS
VKKEPALIYDMLPAKFTALQLRRLNEEIHGKPMDVRNFHKKIASRPYIVPLDEKEEGVPHRAARYYRFDRKIYNRLYCRS
>Mature_239_residues
SRQAFYPHLSVDCVLIGFDEEGLKVLLVEKTQFEPGHTGTISKLPGDLIYEEEELDAAARRVLFDMTGMSSPHLEQFHTF
GAPSRIKNPEDRAWVEAVSGQKIGRLVTVAYMAMLRISTKLRKLMESHKTRWVPVDDLPELAFDHRDIIDLALERVRSSV
KKEPALIYDMLPAKFTALQLRRLNEEIHGKPMDVRNFHKKIASRPYIVPLDEKEEGVPHRAARYYRFDRKIYNRLYCRS

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27838; Mature: 27706

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQAFYPHLSVDCVLIGFDEEGLKVLLVEKTQFEPGHTGTISKLPGDLIYEEEELDAAA
CCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCHHHCCHHHHHHHH
RRVLFDMTGMSSPHLEQFHTFGAPSRIKNPEDRAWVEAVSGQKIGRLVTVAYMAMLRIST
HHHHHHHCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLRKLMESHKTRWVPVDDLPELAFDHRDIIDLALERVRSSVKKEPALIYDMLPAKFTALQ
HHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LRRLNEEIHGKPMDVRNFHKKIASRPYIVPLDEKEEGVPHRAARYYRFDRKIYNRLYCRS
HHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRQAFYPHLSVDCVLIGFDEEGLKVLLVEKTQFEPGHTGTISKLPGDLIYEEEELDAAA
CCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHCCCHHHCCHHHHHHHH
RRVLFDMTGMSSPHLEQFHTFGAPSRIKNPEDRAWVEAVSGQKIGRLVTVAYMAMLRIST
HHHHHHHCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLRKLMESHKTRWVPVDDLPELAFDHRDIIDLALERVRSSVKKEPALIYDMLPAKFTALQ
HHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LRRLNEEIHGKPMDVRNFHKKIASRPYIVPLDEKEEGVPHRAARYYRFDRKIYNRLYCRS
HHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA