| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734760
Identifier: 187734760
GI number: 187734760
Start: 306253
End: 306834
Strand: Direct
Name: 187734760
Synonym: Amuc_0248
Alternate gene names: NA
Gene position: 306253-306834 (Clockwise)
Preceding gene: 187734747
Following gene: 187734764
Centisome position: 11.5
GC content: 54.98
Gene sequence:
>582_bases ATGAAAAAAAACCTCCTTTACCTGCTCGCAGCGGGGCTGTCCGGAACAGCCTTCCTTCACGCCGCGGATACCGTCAAACT GGACCAGCCGGACCTGGAACGGGGAGCTCCGATCATGAAAGCCCTGTCCGACCGTCAATCCATTCGGAGCTTTTCTGAAA AAGCGCTATCCCAAAAAGATTTATCAGACCTGCTCTGGGCGGCCAATGGCATCAACCGTCAGGAATCCGGCAAACGTACA GCCCCGTCCGCCATGAACCGCCAGGACGTTAAAATTTATATATGCACTAAAAACGCCTCCTACCTCTATGACCACAAGGC CCACGCCATGATTCCCGTAAACGATGGGGACGTGCGCCCGGCGGATGCCCCCATATGTCTCATTCTTGTAACGGATACGG CGGAACCCTGGGCTGCCATGGACGCTGGCATTGTCTCCCAGAACATCTCCCTGTTCTGCTCCGGGACGGGACTGGCTACC TATCCGCGCGCCAGCATGAACAAGGATGCCCTGGCAAAGGCCCTGAAACTAACCTCTCCCCAAACACCCATGCTCTGTCA TCCGGTAGGATATAAAAAATAA
Upstream 100 bases:
>100_bases GCGCACAAAAACCTTGTAGCACTTCCGTCCCATGTTAAATTCCGGCTAATGGGAAAATGCAGGAATACCTGCATCTATCA GCCACTCCTGCCGCAAAACC
Downstream 100 bases:
>100_bases CTACTTCCGGCTACATTCTCCGGACAGTCCGGAAAAGAAACCATCAGAAATGGAAATAAATTCCACAACAGGCGGAATTA TGGTTCCGGCAAAATATCCA
Product: nitroreductase
Products: NA
Alternate protein names: NAD(P)H-Flavin Oxidoreductase; NADH Oxidase NoxC-Like Protein; Nitroreductase Family Protein; NADH Oxidase; NADH Oxidase NoxC-Like; SagB-Type Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKKNLLYLLAAGLSGTAFLHAADTVKLDQPDLERGAPIMKALSDRQSIRSFSEKALSQKDLSDLLWAANGINRQESGKRT APSAMNRQDVKIYICTKNASYLYDHKAHAMIPVNDGDVRPADAPICLILVTDTAEPWAAMDAGIVSQNISLFCSGTGLAT YPRASMNKDALAKALKLTSPQTPMLCHPVGYKK
Sequences:
>Translated_193_residues MKKNLLYLLAAGLSGTAFLHAADTVKLDQPDLERGAPIMKALSDRQSIRSFSEKALSQKDLSDLLWAANGINRQESGKRT APSAMNRQDVKIYICTKNASYLYDHKAHAMIPVNDGDVRPADAPICLILVTDTAEPWAAMDAGIVSQNISLFCSGTGLAT YPRASMNKDALAKALKLTSPQTPMLCHPVGYKK >Mature_193_residues MKKNLLYLLAAGLSGTAFLHAADTVKLDQPDLERGAPIMKALSDRQSIRSFSEKALSQKDLSDLLWAANGINRQESGKRT APSAMNRQDVKIYICTKNASYLYDHKAHAMIPVNDGDVRPADAPICLILVTDTAEPWAAMDAGIVSQNISLFCSGTGLAT YPRASMNKDALAKALKLTSPQTPMLCHPVGYKK
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20919; Mature: 20919
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLLYLLAAGLSGTAFLHAADTVKLDQPDLERGAPIMKALSDRQSIRSFSEKALSQKD CCCCEEEEEECCCCCCEEEEECCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSDLLWAANGINRQESGKRTAPSAMNRQDVKIYICTKNASYLYDHKAHAMIPVNDGDVRP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCC ADAPICLILVTDTAEPWAAMDAGIVSQNISLFCSGTGLATYPRASMNKDALAKALKLTSP CCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC QTPMLCHPVGYKK CCCEEECCCCCCC >Mature Secondary Structure MKKNLLYLLAAGLSGTAFLHAADTVKLDQPDLERGAPIMKALSDRQSIRSFSEKALSQKD CCCCEEEEEECCCCCCEEEEECCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSDLLWAANGINRQESGKRTAPSAMNRQDVKIYICTKNASYLYDHKAHAMIPVNDGDVRP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCC ADAPICLILVTDTAEPWAAMDAGIVSQNISLFCSGTGLATYPRASMNKDALAKALKLTSP CCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC QTPMLCHPVGYKK CCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA