| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is mntR [H]
Identifier: 187734758
GI number: 187734758
Start: 303722
End: 304123
Strand: Reverse
Name: mntR [H]
Synonym: Amuc_0246
Alternate gene names: 187734758
Gene position: 304123-303722 (Counterclockwise)
Preceding gene: 187734759
Following gene: 187734757
Centisome position: 11.42
GC content: 51.24
Gene sequence:
>402_bases ATGTTGGAGCTGACCAAGAGCAATGAGGATTATCTGGAAGCTATCGGGTTGCTGTCTGAAAAGAACGGGACGGCCCAGGT GAGGGATATTGCAGAGATGCTTAAGGTAAAGATGCCTTCCGTTACATCTGCCGTCAAGCAACTGGCGGATATGGGACTGG TGGAGTATACGCAGTATGCTCCCGTCAAGCTGACTCCCCAAGGCCGCAGAATTGCCGGGAAAATTATTGTCAGCCACGGT ATTCTGTTTGATTTCCTGCGGGAGGAATTGGCCCTCCCGGAAGAACGCGCCAATGAAGTGGCTTGCCAGATAGAACACAT CATGACTTTTGAGGAGATTGAAAAACTCAGGTCCTGCCGGATCCGCCCTTTTGAGGGTGGAGAGGAAAATTCCGCCAAGT AG
Upstream 100 bases:
>100_bases GCGAATGGTCATATTCGCGGCGGTTTTTTTCTCATTCCAAAGAAGTCTGGAAAAAATCTTGAGTTAGTTTCCACTAAAGT ATTAGCTTTCATTTTATACC
Downstream 100 bases:
>100_bases CATGGCTCCGGGCTCTCTTATGGGAAGCCGGGGATATGGATGGCCGAGCCACATTCCGGAAAGAGGGGGAAGGGCAGAAG ACGGTGATGTAAGGTAAGGG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Manganese transport regulator [H]
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLELTKSNEDYLEAIGLLSEKNGTAQVRDIAEMLKVKMPSVTSAVKQLADMGLVEYTQYAPVKLTPQGRRIAGKIIVSHG ILFDFLREELALPEERANEVACQIEHIMTFEEIEKLRSCRIRPFEGGEENSAK
Sequences:
>Translated_133_residues MLELTKSNEDYLEAIGLLSEKNGTAQVRDIAEMLKVKMPSVTSAVKQLADMGLVEYTQYAPVKLTPQGRRIAGKIIVSHG ILFDFLREELALPEERANEVACQIEHIMTFEEIEKLRSCRIRPFEGGEENSAK >Mature_133_residues MLELTKSNEDYLEAIGLLSEKNGTAQVRDIAEMLKVKMPSVTSAVKQLADMGLVEYTQYAPVKLTPQGRRIAGKIIVSHG ILFDFLREELALPEERANEVACQIEHIMTFEEIEKLRSCRIRPFEGGEENSAK
Specific function: Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon [H]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR022897 - InterPro: IPR011991 [H]
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]
EC number: NA
Molecular weight: Translated: 14966; Mature: 14966
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELTKSNEDYLEAIGLLSEKNGTAQVRDIAEMLKVKMPSVTSAVKQLADMGLVEYTQYA CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCC PVKLTPQGRRIAGKIIVSHGILFDFLREELALPEERANEVACQIEHIMTFEEIEKLRSCR CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IRPFEGGEENSAK CCCCCCCCCCCCC >Mature Secondary Structure MLELTKSNEDYLEAIGLLSEKNGTAQVRDIAEMLKVKMPSVTSAVKQLADMGLVEYTQYA CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCC PVKLTPQGRRIAGKIIVSHGILFDFLREELALPEERANEVACQIEHIMTFEEIEKLRSCR CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IRPFEGGEENSAK CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA