Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734740

Identifier: 187734740

GI number: 187734740

Start: 284763

End: 286721

Strand: Reverse

Name: 187734740

Synonym: Amuc_0228

Alternate gene names: NA

Gene position: 286721-284763 (Counterclockwise)

Preceding gene: 187734742

Following gene: 187734739

Centisome position: 10.76

GC content: 57.94

Gene sequence:

>1959_bases
ATGGACAACTTGCAGAAACGGCAGGCAGGCCATGAGGTCCGGCTGCCGGGGGGATTCGCTTTTTCCTTGAGGGAAGAGGA
TGCCTGCCGGGCTGTTACTCCTTCCGTGCTGGAAGGATTGCTGGGGCGTTTCCTGACGGACGCCCGCCGTTCCGGGACGG
TGTATACCCCCGGTTTTCTTGTTCGCTGGATGGCCCGGGAAGCGGTATCTTCCTGGCTGGAATCCAGATTGCCTTCTCCC
AGGAGCGGTGATGAAGAAGCCGGGTTGCTGGGAAGTATCCGTGTGCTGGATTTATCCGTAGGGGCCGGAGCATTCACCAT
GGGAATGCTCCGGGAGCTTGTCGCCCGCAGAAAGCTTCTGGAACCGGATTGCCCGGAGCCCGATTTAATCCGCGCCGTTT
TGGAAGAGAATATTTACGGAGTGGATGTTTGCGCGGAGGCATTGGAGGTGGCCCGTTTCCGTTTTCGTTGCGCATGGTTG
GCCGCCGGAGGAAAGGGGGATTTACGGGATCGCCTGTTGTGCGGGGACAGTCTGGATATGTCTGCGTCCGGCGTCTGGCG
TCAGGGTCTTTCAACGGTGATGGAGGAAGGAGGCTTTGACCTGGTGATCGGCAATCCCCCTTTTGTCGGAGAAAAAGGGA
ACAAGGAATTATTTGACCGTTTGAAATGTTCTTCCCTTGCTTCCTACTGCTCTTCCCGCATGGATTACTGGTACGTGTTT
GCCTGTGTGGGGCTGGATGCCCTGAAGCGGGGGGGCGTAATGCATCTGGTCGTTCCCAACAAGTGGATGTCTAATGCGGG
AGCCGCCTCTCTCCGCCGCAAGCTGCTGGAAGATTGCGGTTTGCTGCGCCTGTCGGATTTCGGAGCCTGCCGCGTGTTTG
AATCCGCCCGCGTCCATACCATGACTGTTCTGGCGGAGAAAAAGGGAGAGGGAGGCGGACGCCTGGTTCCGGAATACCGC
CGTTTTGGCGGCTCCTTGAATGACGTGGAATCATTTCTGGAACATGAGCCGTACCGTCGGTTTCCCTTGCCGGAAGATGC
CGGAGCGTGCGTCAGGGAAGGTTTGTCCTTCTGCTCTGCAGCAGAGCGGCATCTTCTGGAAAAGATGGATGCCTGCCGGA
ATTTCAGGCTGGATGCCGCAAAGGAAATGACGCAGGGGATTGTGCCGAATCCTGACGTCGTTTCTTCCCGAGCTCTGGAG
AATCTGGCGCCGGAAACAGTGCGGCGGTACGGAATCCGGAGGGGGGATGGGGTATTTGTCTTGCCTCAGGGGTATTTTGG
CCTGTTGCCGGAACGGGAGCGGCGTTTTCTCAAACCTCTGTATGAACCTGTCCAGGCAGGGCGGCATGCACTGAAAGCTC
CGGAGAAGGTGCTGTTATATCTGACCCCGTCCAACGGAGCGGAGCAGGCCGTTACGCTTTTGCGCCATTTGGAAAAATTC
CGTCCCCTGATGGAGGCCCGGCGGGAAACACGCATGGGCCGCATGAAATATTACCATGTGCACTGGCCCCGGCAGGAACG
TTTTTTCCGGCCCGGCCCCAAAATTCTGGCTGTCAGGAAGTGTGCCCGTCCAACCTTCTCCTATACGGAAAAGGAAGCTT
ATGTGATGATGGCATTCAACGTGATACGCTCGGAACGCGTGAGCATGAAATATCTGGCGGCCCTGTTCAATTCGCGCCTG
ATGCAGTTTTGGTTTCTCCGCCGGGGAAAAATGCAGGGGGATTTTTTCCAGATGGATACCGCCCCTGTCCTCCGGGCTCC
CATCCGGGTCCCCGGTCTGTCCCTGCTGCGGGAAGTGGAAGGGCTGGCGGACGCTCTCGCGGCCCGCTATTGCCCGGAAG
GGGATGAGCGGATGAATGGGCTGATGGAAGACATTTACGGCCTTTCCCCGCAGGAGCGGGAAATAATTATTCAGGCATGT
TCCCCCATGCGGGCCGGGAGGGAAAGCTTGCCGGAGTGA

Upstream 100 bases:

>100_bases
GGAGCGGAACGTTCAGGATTGTTTTATAGCTCAGTATTTCTCCGTGGAGAAGGGCAACGGGGGCCGTCCTGAAACCTGGG
AACGATTGAAAGAGGTTTTG

Downstream 100 bases:

>100_bases
TGATTTGGTGCCGGTAACTGTTCGCGATGATGCCAGGCTGCTGCATCGTTGTTTCTTCATCGTACAGGAAGTGATTGAAA
TGGCCCGGTTCATCAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Restriction-; DNA Methylase; Eco57I Restriction Endonuclease; N-6 DNA Methylase; DNA Methyltransferase; Type II Endonuclease-Methyltransferasefusion Protein; Type IIS Restriction/; Type II Restriction Methylase; DNA Methyltransferase; Type IIS Restriction Endonuclease; Type I Restriction- System Methyltransferase Subunit-Like; Type II Restriction; Fused Endonuclease-Methyltransferase

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP
RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL
AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF
ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR
RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE
NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF
RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL
MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC
SPMRAGRESLPE

Sequences:

>Translated_652_residues
MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP
RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL
AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF
ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR
RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE
NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF
RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL
MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC
SPMRAGRESLPE
>Mature_652_residues
MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP
RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL
AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF
ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR
RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE
NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF
RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL
MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC
SPMRAGRESLPE

Specific function: Unknown

COG id: COG1002

COG function: function code V; Type II restriction enzyme, methylase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73422; Mature: 73422

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFL
CCCHHHHHCCCEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHH
VRWMAREAVSSWLESRLPSPRSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHC
EPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWLAAGGKGDLRDRLLCGDSLDM
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCC
SASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHT
HHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCHHE
MTVLAEKKGEGGGRLVPEYRRFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSA
EEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALENLAPETVRRYGIRRGDGVFV
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEE
LPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFN
HHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
VIRSERVSMKYLAALFNSRLMQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCHHHHHHHHH
GLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQACSPMRAGRESLPE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFL
CCCHHHHHCCCEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHH
VRWMAREAVSSWLESRLPSPRSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHC
EPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWLAAGGKGDLRDRLLCGDSLDM
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCC
SASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF
CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHT
HHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCHHE
MTVLAEKKGEGGGRLVPEYRRFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSA
EEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALENLAPETVRRYGIRRGDGVFV
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEE
LPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFN
HHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
VIRSERVSMKYLAALFNSRLMQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCHHHHHHHHH
GLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQACSPMRAGRESLPE
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA