| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734740
Identifier: 187734740
GI number: 187734740
Start: 284763
End: 286721
Strand: Reverse
Name: 187734740
Synonym: Amuc_0228
Alternate gene names: NA
Gene position: 286721-284763 (Counterclockwise)
Preceding gene: 187734742
Following gene: 187734739
Centisome position: 10.76
GC content: 57.94
Gene sequence:
>1959_bases ATGGACAACTTGCAGAAACGGCAGGCAGGCCATGAGGTCCGGCTGCCGGGGGGATTCGCTTTTTCCTTGAGGGAAGAGGA TGCCTGCCGGGCTGTTACTCCTTCCGTGCTGGAAGGATTGCTGGGGCGTTTCCTGACGGACGCCCGCCGTTCCGGGACGG TGTATACCCCCGGTTTTCTTGTTCGCTGGATGGCCCGGGAAGCGGTATCTTCCTGGCTGGAATCCAGATTGCCTTCTCCC AGGAGCGGTGATGAAGAAGCCGGGTTGCTGGGAAGTATCCGTGTGCTGGATTTATCCGTAGGGGCCGGAGCATTCACCAT GGGAATGCTCCGGGAGCTTGTCGCCCGCAGAAAGCTTCTGGAACCGGATTGCCCGGAGCCCGATTTAATCCGCGCCGTTT TGGAAGAGAATATTTACGGAGTGGATGTTTGCGCGGAGGCATTGGAGGTGGCCCGTTTCCGTTTTCGTTGCGCATGGTTG GCCGCCGGAGGAAAGGGGGATTTACGGGATCGCCTGTTGTGCGGGGACAGTCTGGATATGTCTGCGTCCGGCGTCTGGCG TCAGGGTCTTTCAACGGTGATGGAGGAAGGAGGCTTTGACCTGGTGATCGGCAATCCCCCTTTTGTCGGAGAAAAAGGGA ACAAGGAATTATTTGACCGTTTGAAATGTTCTTCCCTTGCTTCCTACTGCTCTTCCCGCATGGATTACTGGTACGTGTTT GCCTGTGTGGGGCTGGATGCCCTGAAGCGGGGGGGCGTAATGCATCTGGTCGTTCCCAACAAGTGGATGTCTAATGCGGG AGCCGCCTCTCTCCGCCGCAAGCTGCTGGAAGATTGCGGTTTGCTGCGCCTGTCGGATTTCGGAGCCTGCCGCGTGTTTG AATCCGCCCGCGTCCATACCATGACTGTTCTGGCGGAGAAAAAGGGAGAGGGAGGCGGACGCCTGGTTCCGGAATACCGC CGTTTTGGCGGCTCCTTGAATGACGTGGAATCATTTCTGGAACATGAGCCGTACCGTCGGTTTCCCTTGCCGGAAGATGC CGGAGCGTGCGTCAGGGAAGGTTTGTCCTTCTGCTCTGCAGCAGAGCGGCATCTTCTGGAAAAGATGGATGCCTGCCGGA ATTTCAGGCTGGATGCCGCAAAGGAAATGACGCAGGGGATTGTGCCGAATCCTGACGTCGTTTCTTCCCGAGCTCTGGAG AATCTGGCGCCGGAAACAGTGCGGCGGTACGGAATCCGGAGGGGGGATGGGGTATTTGTCTTGCCTCAGGGGTATTTTGG CCTGTTGCCGGAACGGGAGCGGCGTTTTCTCAAACCTCTGTATGAACCTGTCCAGGCAGGGCGGCATGCACTGAAAGCTC CGGAGAAGGTGCTGTTATATCTGACCCCGTCCAACGGAGCGGAGCAGGCCGTTACGCTTTTGCGCCATTTGGAAAAATTC CGTCCCCTGATGGAGGCCCGGCGGGAAACACGCATGGGCCGCATGAAATATTACCATGTGCACTGGCCCCGGCAGGAACG TTTTTTCCGGCCCGGCCCCAAAATTCTGGCTGTCAGGAAGTGTGCCCGTCCAACCTTCTCCTATACGGAAAAGGAAGCTT ATGTGATGATGGCATTCAACGTGATACGCTCGGAACGCGTGAGCATGAAATATCTGGCGGCCCTGTTCAATTCGCGCCTG ATGCAGTTTTGGTTTCTCCGCCGGGGAAAAATGCAGGGGGATTTTTTCCAGATGGATACCGCCCCTGTCCTCCGGGCTCC CATCCGGGTCCCCGGTCTGTCCCTGCTGCGGGAAGTGGAAGGGCTGGCGGACGCTCTCGCGGCCCGCTATTGCCCGGAAG GGGATGAGCGGATGAATGGGCTGATGGAAGACATTTACGGCCTTTCCCCGCAGGAGCGGGAAATAATTATTCAGGCATGT TCCCCCATGCGGGCCGGGAGGGAAAGCTTGCCGGAGTGA
Upstream 100 bases:
>100_bases GGAGCGGAACGTTCAGGATTGTTTTATAGCTCAGTATTTCTCCGTGGAGAAGGGCAACGGGGGCCGTCCTGAAACCTGGG AACGATTGAAAGAGGTTTTG
Downstream 100 bases:
>100_bases TGATTTGGTGCCGGTAACTGTTCGCGATGATGCCAGGCTGCTGCATCGTTGTTTCTTCATCGTACAGGAAGTGATTGAAA TGGCCCGGTTCATCAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type II Restriction-; DNA Methylase; Eco57I Restriction Endonuclease; N-6 DNA Methylase; DNA Methyltransferase; Type II Endonuclease-Methyltransferasefusion Protein; Type IIS Restriction/; Type II Restriction Methylase; DNA Methyltransferase; Type IIS Restriction Endonuclease; Type I Restriction- System Methyltransferase Subunit-Like; Type II Restriction; Fused Endonuclease-Methyltransferase
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC SPMRAGRESLPE
Sequences:
>Translated_652_residues MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC SPMRAGRESLPE >Mature_652_residues MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFLVRWMAREAVSSWLESRLPSP RSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLLEPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWL AAGGKGDLRDRLLCGDSLDMSASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHTMTVLAEKKGEGGGRLVPEYR RFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSAAERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALE NLAPETVRRYGIRRGDGVFVLPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFNVIRSERVSMKYLAALFNSRL MQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVEGLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQAC SPMRAGRESLPE
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73422; Mature: 73422
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFL CCCHHHHHCCCEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHH VRWMAREAVSSWLESRLPSPRSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHC EPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWLAAGGKGDLRDRLLCGDSLDM CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCC SASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHT HHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCHHE MTVLAEKKGEGGGRLVPEYRRFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSA EEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALENLAPETVRRYGIRRGDGVFV HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEE LPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFN HHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH VIRSERVSMKYLAALFNSRLMQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCHHHHHHHHH GLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQACSPMRAGRESLPE HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MDNLQKRQAGHEVRLPGGFAFSLREEDACRAVTPSVLEGLLGRFLTDARRSGTVYTPGFL CCCHHHHHCCCEEECCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHH VRWMAREAVSSWLESRLPSPRSGDEEAGLLGSIRVLDLSVGAGAFTMGMLRELVARRKLL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHC EPDCPEPDLIRAVLEENIYGVDVCAEALEVARFRFRCAWLAAGGKGDLRDRLLCGDSLDM CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCCCC SASGVWRQGLSTVMEEGGFDLVIGNPPFVGEKGNKELFDRLKCSSLASYCSSRMDYWYVF CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH ACVGLDALKRGGVMHLVVPNKWMSNAGAASLRRKLLEDCGLLRLSDFGACRVFESARVHT HHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCHHE MTVLAEKKGEGGGRLVPEYRRFGGSLNDVESFLEHEPYRRFPLPEDAGACVREGLSFCSA EEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AERHLLEKMDACRNFRLDAAKEMTQGIVPNPDVVSSRALENLAPETVRRYGIRRGDGVFV HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEE LPQGYFGLLPERERRFLKPLYEPVQAGRHALKAPEKVLLYLTPSNGAEQAVTLLRHLEKF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH RPLMEARRETRMGRMKYYHVHWPRQERFFRPGPKILAVRKCARPTFSYTEKEAYVMMAFN HHHHHHHHHHHHCCEEEEEEECCCHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH VIRSERVSMKYLAALFNSRLMQFWFLRRGKMQGDFFQMDTAPVLRAPIRVPGLSLLREVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCHHHHHHHHH GLADALAARYCPEGDERMNGLMEDIYGLSPQEREIIIQACSPMRAGRESLPE HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA