| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734720
Identifier: 187734720
GI number: 187734720
Start: 257265
End: 257966
Strand: Direct
Name: 187734720
Synonym: Amuc_0207
Alternate gene names: NA
Gene position: 257265-257966 (Clockwise)
Preceding gene: 187734719
Following gene: 187734724
Centisome position: 9.66
GC content: 58.97
Gene sequence:
>702_bases ATGAACTGGATGATTTACCCGGCAGCCAGGGCTTTCATCAAAGTCTGCGCCGTTCTTTTCGGCGCGGGCGCAGCAGCGGC AGTCCTCATCCATCTGTTCATGCCTTTTTTCCTCCGCTCTCCCCGGACAGCCGCACCCTTCCTGCTTTTGGGCACAGGGG CGGAATTGCTCTCCATCCTTTCCCTGTCCTTCCTCATGTTCTGGGGCGCCAGAGTCCTGCTGGCCTCCCGCGGAAGCAGA ATAACAAGAAATCTGAGCATGCTGGCCTTCCTGCCCGCCCTGTACGCCCTCCTCATTCCGTTTGCGGGCATGCCCGTCCC ATCGCAATATACGGAAATGGACAGGGTTTGGGAGGCCGTCCTCCTTCTGGCGGCCGTCATTTCTTTCTTTTCCTTCCCTT ATACGGCGGGATACGAAGCCGCAGGCAGGAGATTATTCCTGGCCTGGGGCATCGCGGCGGCAGGCTGCGGTTTGCAGAGC GCCCTGTTTTTTCTTGCCATCCTGTTGCGTCAGTTCCTGTCCACCGCAGTTCCCTCCCTGGCAGTGCCTGTTGCATGGCT GGCCGTTCTTCTGTCCTGCGGCCTGGAAATCATGCTGGCGGCCCTTTCCGCTATTCTGGCGCAGCGCCTGTTTAAAGAGG TCATGTCCATAGCATCCATGCCGGAACCGATTGATCCTTCCATGCCGGGCAACCGTCCCTGA
Upstream 100 bases:
>100_bases GCATTGGCATCCATGAATTCACGTTAACCCCTCAGGACCGCTTCCGCAAAGGGAGCGGTCCTTTTCCTTTTTCCCATCCC CTCTACTCCTTCTCTTCACC
Downstream 100 bases:
>100_bases CTTTCCTCCCCTCCGTTTTTACCGGTCTGCCGGAAAGCACCCTCATTCCCCGGCATGAAAGGCTTTTACGGCTTTGCGCA AAAAGCCGTCCGGAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNWMIYPAARAFIKVCAVLFGAGAAAAVLIHLFMPFFLRSPRTAAPFLLLGTGAELLSILSLSFLMFWGARVLLASRGSR ITRNLSMLAFLPALYALLIPFAGMPVPSQYTEMDRVWEAVLLLAAVISFFSFPYTAGYEAAGRRLFLAWGIAAAGCGLQS ALFFLAILLRQFLSTAVPSLAVPVAWLAVLLSCGLEIMLAALSAILAQRLFKEVMSIASMPEPIDPSMPGNRP
Sequences:
>Translated_233_residues MNWMIYPAARAFIKVCAVLFGAGAAAAVLIHLFMPFFLRSPRTAAPFLLLGTGAELLSILSLSFLMFWGARVLLASRGSR ITRNLSMLAFLPALYALLIPFAGMPVPSQYTEMDRVWEAVLLLAAVISFFSFPYTAGYEAAGRRLFLAWGIAAAGCGLQS ALFFLAILLRQFLSTAVPSLAVPVAWLAVLLSCGLEIMLAALSAILAQRLFKEVMSIASMPEPIDPSMPGNRP >Mature_233_residues MNWMIYPAARAFIKVCAVLFGAGAAAAVLIHLFMPFFLRSPRTAAPFLLLGTGAELLSILSLSFLMFWGARVLLASRGSR ITRNLSMLAFLPALYALLIPFAGMPVPSQYTEMDRVWEAVLLLAAVISFFSFPYTAGYEAAGRRLFLAWGIAAAGCGLQS ALFFLAILLRQFLSTAVPSLAVPVAWLAVLLSCGLEIMLAALSAILAQRLFKEVMSIASMPEPIDPSMPGNRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25165; Mature: 25165
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWMIYPAARAFIKVCAVLFGAGAAAAVLIHLFMPFFLRSPRTAAPFLLLGTGAELLSIL CCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHH SLSFLMFWGARVLLASRGSRITRNLSMLAFLPALYALLIPFAGMPVPSQYTEMDRVWEAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLLAAVISFFSFPYTAGYEAAGRRLFLAWGIAAAGCGLQSALFFLAILLRQFLSTAVPSL HHHHHHHHHHHCCCCCCHHHHCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AVPVAWLAVLLSCGLEIMLAALSAILAQRLFKEVMSIASMPEPIDPSMPGNRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNWMIYPAARAFIKVCAVLFGAGAAAAVLIHLFMPFFLRSPRTAAPFLLLGTGAELLSIL CCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHH SLSFLMFWGARVLLASRGSRITRNLSMLAFLPALYALLIPFAGMPVPSQYTEMDRVWEAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLLAAVISFFSFPYTAGYEAAGRRLFLAWGIAAAGCGLQSALFFLAILLRQFLSTAVPSL HHHHHHHHHHHCCCCCCHHHHCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AVPVAWLAVLLSCGLEIMLAALSAILAQRLFKEVMSIASMPEPIDPSMPGNRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA