Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734712

Identifier: 187734712

GI number: 187734712

Start: 248357

End: 249895

Strand: Reverse

Name: 187734712

Synonym: Amuc_0199

Alternate gene names: NA

Gene position: 249895-248357 (Counterclockwise)

Preceding gene: 187734721

Following gene: 187734711

Centisome position: 9.38

GC content: 62.05

Gene sequence:

>1539_bases
ATGTTCAAGAGTGGATTAGCCGTGTTATTTCTGCTGGCGTCGTGGTTTTCCGCCGCGTGTGCCTATGAGCTGCTGCCCGC
TCATGTGGCCGTGGTTTATAACGGAAAATCCGAGCTGAGCCGCCGCATGGCCAGGGAGTATGCGCGGGTGCGCGGCGTTC
CAGAAGGGAATCTCGTTTCCCTGGATTGCCCCATGACCAGCGAGATTTCGCGGAAGGAATATGAGGATACGATCCGCGTC
CCGCTGCTGGAGGCGGCGCGGAAACAACGGTGGTGGGTGCCTTCCGGCATTGCGTCCTCCCCCTTGATGAACCGGAAGAT
TTTTGTGCTGGTGCTGATGGCGGACCTGCCGATGAAGATACGGCATGAAACGCCCGCTCCCCTTCCCGGGAAAGGCGTCA
ACCAGATGCAGACGGATCGCGCTGCGGTGGATTCCGAACTGGCTCTGCTGGCGGTGGGCGGTTATGAAAGGAAGTCCTGG
CAGGTGAATCCCTATTTTAATAAAAGGGAGGATTTTGTGGGTTCCGGCCTTCCTTCGTTTCTGGTATGCCGCCTGGACGG
ACTGACGCCCGATACCTGCATGCGGCTGGTGGCGGAACCGGCGAACGTGGAGAAAAAAGGTTTATGGGGGTGGGCCGTTG
TGGACCGGGGCGGTCCCTATGCCCAGGGGGACCGGTGGCTGGACGACGTGTTCGAGCGCGTGAGGGAGGCGGGCATTCCC
GCTTATCTGGATGACTGGCCCCAGACCCTGCCGGAAAAATTCCCCTTGAGCCGGGATACGGCTCTTTACTGCGGGTGGTA
TGCGGGGAATGCGAACGGACCGTTTTCGGATCCTTCGTTCCGCTTCCGGCCCGGGGCGATAGCCATGCATCTGCATTCCT
TCAGCGCCGCCGATTTCAAGGTCCCCGGCAGGGGGTGGAGTTCCGCCCTGCTGGAGAAGGGGGCTGCTGTGACGGTGGGA
AATGTGTATGAGCCGTTCCTGGGCGCCTGCCACCGCTTTGATATTTTTGTGGACCGCCTCCTGGACGGCTATACCGTGGC
GGAGGCTTCCTGGATGAGCATGCCTGTGCTGTCCTGGCAGGGGGTGGTGTTCGGAGACCCCCTGTACCGTCCATACGCCC
GCATGAAGGATATGGACGTGGAGCCGACGGAAGAAGACCGTTATTTCCAGGGGTGGTGGGCTTCCTCCGTGCAGTTCGGA
GACCGCTGGAAGGACCGTTCCGCGCGTTTGATGGAGTCCGCCCGGAAGGCCCCTTTTTCCTGCCTTTATGAAGCTCTGGC
GCTGGAATGCCTGTACCGGAAGGAACCGGCCCGCGCCGGAGAGCTCCTTTCCTCCGCCCTGGACGGCGCGGCTGACGCCC
GCACCCGCGCGCGCCTGCTGCTGGAAATCCTGATGGCGGAACGGGCCCGGGGCGGCAACAAGGCCTTTCTGCAGCGGGCG
GACGGCATCCGGGGCCTTATGTCTTCCTCCGCTTTTCTTCCTGCGCTGGAGGAATGGCTTGCCAGGGTGGCTCCGCCGCC
GGCCCCGCCGAAAAAATAA

Upstream 100 bases:

>100_bases
TATTTTTTTAGGATGTGAAGCGAAAAGCGGAAAAATGGCGAATTCGTGGCCGTCCCTTTCACCTGCTTGATTGCCCCGGA
AGATGAGGTATGGTAGGGGC

Downstream 100 bases:

>100_bases
ATTAAGGACGTACGGCAAATTTGGATTGCCTTTTAGGGGATTATGGCTCATATTCTGCGTCCCGTAAGTTTTCCTTTTAC
TGATATTCACCAGCAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MFKSGLAVLFLLASWFSAACAYELLPAHVAVVYNGKSELSRRMAREYARVRGVPEGNLVSLDCPMTSEISRKEYEDTIRV
PLLEAARKQRWWVPSGIASSPLMNRKIFVLVLMADLPMKIRHETPAPLPGKGVNQMQTDRAAVDSELALLAVGGYERKSW
QVNPYFNKREDFVGSGLPSFLVCRLDGLTPDTCMRLVAEPANVEKKGLWGWAVVDRGGPYAQGDRWLDDVFERVREAGIP
AYLDDWPQTLPEKFPLSRDTALYCGWYAGNANGPFSDPSFRFRPGAIAMHLHSFSAADFKVPGRGWSSALLEKGAAVTVG
NVYEPFLGACHRFDIFVDRLLDGYTVAEASWMSMPVLSWQGVVFGDPLYRPYARMKDMDVEPTEEDRYFQGWWASSVQFG
DRWKDRSARLMESARKAPFSCLYEALALECLYRKEPARAGELLSSALDGAADARTRARLLLEILMAERARGGNKAFLQRA
DGIRGLMSSSAFLPALEEWLARVAPPPAPPKK

Sequences:

>Translated_512_residues
MFKSGLAVLFLLASWFSAACAYELLPAHVAVVYNGKSELSRRMAREYARVRGVPEGNLVSLDCPMTSEISRKEYEDTIRV
PLLEAARKQRWWVPSGIASSPLMNRKIFVLVLMADLPMKIRHETPAPLPGKGVNQMQTDRAAVDSELALLAVGGYERKSW
QVNPYFNKREDFVGSGLPSFLVCRLDGLTPDTCMRLVAEPANVEKKGLWGWAVVDRGGPYAQGDRWLDDVFERVREAGIP
AYLDDWPQTLPEKFPLSRDTALYCGWYAGNANGPFSDPSFRFRPGAIAMHLHSFSAADFKVPGRGWSSALLEKGAAVTVG
NVYEPFLGACHRFDIFVDRLLDGYTVAEASWMSMPVLSWQGVVFGDPLYRPYARMKDMDVEPTEEDRYFQGWWASSVQFG
DRWKDRSARLMESARKAPFSCLYEALALECLYRKEPARAGELLSSALDGAADARTRARLLLEILMAERARGGNKAFLQRA
DGIRGLMSSSAFLPALEEWLARVAPPPAPPKK
>Mature_512_residues
MFKSGLAVLFLLASWFSAACAYELLPAHVAVVYNGKSELSRRMAREYARVRGVPEGNLVSLDCPMTSEISRKEYEDTIRV
PLLEAARKQRWWVPSGIASSPLMNRKIFVLVLMADLPMKIRHETPAPLPGKGVNQMQTDRAAVDSELALLAVGGYERKSW
QVNPYFNKREDFVGSGLPSFLVCRLDGLTPDTCMRLVAEPANVEKKGLWGWAVVDRGGPYAQGDRWLDDVFERVREAGIP
AYLDDWPQTLPEKFPLSRDTALYCGWYAGNANGPFSDPSFRFRPGAIAMHLHSFSAADFKVPGRGWSSALLEKGAAVTVG
NVYEPFLGACHRFDIFVDRLLDGYTVAEASWMSMPVLSWQGVVFGDPLYRPYARMKDMDVEPTEEDRYFQGWWASSVQFG
DRWKDRSARLMESARKAPFSCLYEALALECLYRKEPARAGELLSSALDGAADARTRARLLLEILMAERARGGNKAFLQRA
DGIRGLMSSSAFLPALEEWLARVAPPPAPPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57195; Mature: 57195

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSGLAVLFLLASWFSAACAYELLPAHVAVVYNGKSELSRRMAREYARVRGVPEGNLVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE
LDCPMTSEISRKEYEDTIRVPLLEAARKQRWWVPSGIASSPLMNRKIFVLVLMADLPMKI
ECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
RHETPAPLPGKGVNQMQTDRAAVDSELALLAVGGYERKSWQVNPYFNKREDFVGSGLPSF
CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCHHH
LVCRLDGLTPDTCMRLVAEPANVEKKGLWGWAVVDRGGPYAQGDRWLDDVFERVREAGIP
HHHEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
AYLDDWPQTLPEKFPLSRDTALYCGWYAGNANGPFSDPSFRFRPGAIAMHLHSFSAADFK
CHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCEE
VPGRGWSSALLEKGAAVTVGNVYEPFLGACHRFDIFVDRLLDGYTVAEASWMSMPVLSWQ
CCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCC
GVVFGDPLYRPYARMKDMDVEPTEEDRYFQGWWASSVQFGDRWKDRSARLMESARKAPFS
CEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHH
CLYEALALECLYRKEPARAGELLSSALDGAADARTRARLLLEILMAERARGGNKAFLQRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
DGIRGLMSSSAFLPALEEWLARVAPPPAPPKK
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFKSGLAVLFLLASWFSAACAYELLPAHVAVVYNGKSELSRRMAREYARVRGVPEGNLVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE
LDCPMTSEISRKEYEDTIRVPLLEAARKQRWWVPSGIASSPLMNRKIFVLVLMADLPMKI
ECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE
RHETPAPLPGKGVNQMQTDRAAVDSELALLAVGGYERKSWQVNPYFNKREDFVGSGLPSF
CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCHHHHHCCCHHH
LVCRLDGLTPDTCMRLVAEPANVEKKGLWGWAVVDRGGPYAQGDRWLDDVFERVREAGIP
HHHEECCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
AYLDDWPQTLPEKFPLSRDTALYCGWYAGNANGPFSDPSFRFRPGAIAMHLHSFSAADFK
CHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCEE
VPGRGWSSALLEKGAAVTVGNVYEPFLGACHRFDIFVDRLLDGYTVAEASWMSMPVLSWQ
CCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCC
GVVFGDPLYRPYARMKDMDVEPTEEDRYFQGWWASSVQFGDRWKDRSARLMESARKAPFS
CEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCHHH
CLYEALALECLYRKEPARAGELLSSALDGAADARTRARLLLEILMAERARGGNKAFLQRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
DGIRGLMSSSAFLPALEEWLARVAPPPAPPKK
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA