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The map label for this gene is xynB [H]

Identifier: 187734701

GI number: 187734701

Start: 236547

End: 237587

Strand: Direct

Name: xynB [H]

Synonym: Amuc_0188

Alternate gene names: 187734701

Gene position: 236547-237587 (Clockwise)

Preceding gene: 187734700

Following gene: 187734702

Centisome position: 8.88

GC content: 60.71

Gene sequence:

>1041_bases
ATGAATAAGAAACAGATATTACTCTCCGCTCTTTTTCTGACATTCGCCTGTGCTTCAGCCGGGGCCGCTCCGCCTGAGCC
GTCCGCGCTGGGCGCCTTCTGCCCTCCCTCAGAGGGAAAAGCCTTTCACTCCGGATGGATTTCCCTTGGGCTCAAAGCGG
CGGACCTGAAAGAAAAACAAGCCTCCGCCGGACACATTACGGACGTAGGGGAAGCGCAAATCCAGCTTCACTTTCCCGCC
GGATGGAGTCCGCAGGACAGGCGCACGGCCCTGTGTATTTTTCCGGGAGGGGGGTATGCCATCCAGGCCATTGAAAAGGA
AGGGAGCCGCATTGCCGGCTGGGCGGCGGAACACGGCATGGTGGGGGTTGTCGTGAAATACCGCGTTTCAGGAACCGGCA
ATGCCCTGGGGAAGTTTCCCGGTCCCCTGCTGGACGCCCGCCAGGCTCTGAGGACCGTGCGGAAAAACGCCTCTTCCCTG
GGAATTGCCCCTCTTCGCATCGGCGTCATGGGCTTTTCCGCTGGCGGCCATCTGGCGGCCATGGCCTCTACGCTGTGGAA
CCGCACCCTGCCGGAAGAAGCGGAAAATCCGCTGAAAAACATTTCCGCCCGTCCGGATTTTTCCATGTTTATTTATCCCG
TCATTACCATGGCGCCCCATACTACCCACGGGGGAACGCGCAACAAAATATTGGGGGCCCATCCATCCCCTGCCCTGGAG
GAGATGTGTTCCGCGGAGAGACAGGTGACGGAGCAGGCGCCGCCAGTGTTCCTCGTCCACGCTCTGGATGACGGCGTTTC
CTGCGCCAACAGCAGGCTGATGGAACAGGCTTGCCGGGAAAAGGGGGTTCCCGCCAGTCTGAACTTCTATCCCACGGGAG
GCCACGGGTATGGCATGGAAAAACGCGGACATCCCACGGATCAATGGCCTGAAGCCGCCGAACAATGGCTCAGGGAACAG
GGATTCCTTTCTTCCCCGTCTTCTGCCCGCGGGGGTGCGCCCTCCGGAGCGGGCACTTCCTCCGGAACACGGCGGGAATG
A

Upstream 100 bases:

>100_bases
ACCATGAAACCAGCGATACGGCTGAAAAGCTGGACTATCCCCAGTTTGCAGAAGTGGTGCAGGGCCTTTCCAAACTCGTC
ATTTCACTGGCCAACAAACC

Downstream 100 bases:

>100_bases
ATGTGCTAGGACCGGCGTGTGCCGCACCGCAGGGTTGACCGGAACCGGGCCCGGTGGTACTTTTTCCGGGCATGAGTGCG
CCCGAAAAGAATTACAAAGA

Product: Esterase/lipase-like protein

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNKKQILLSALFLTFACASAGAAPPEPSALGAFCPPSEGKAFHSGWISLGLKAADLKEKQASAGHITDVGEAQIQLHFPA
GWSPQDRRTALCIFPGGGYAIQAIEKEGSRIAGWAAEHGMVGVVVKYRVSGTGNALGKFPGPLLDARQALRTVRKNASSL
GIAPLRIGVMGFSAGGHLAAMASTLWNRTLPEEAENPLKNISARPDFSMFIYPVITMAPHTTHGGTRNKILGAHPSPALE
EMCSAERQVTEQAPPVFLVHALDDGVSCANSRLMEQACREKGVPASLNFYPTGGHGYGMEKRGHPTDQWPEAAEQWLREQ
GFLSSPSSARGGAPSGAGTSSGTRRE

Sequences:

>Translated_346_residues
MNKKQILLSALFLTFACASAGAAPPEPSALGAFCPPSEGKAFHSGWISLGLKAADLKEKQASAGHITDVGEAQIQLHFPA
GWSPQDRRTALCIFPGGGYAIQAIEKEGSRIAGWAAEHGMVGVVVKYRVSGTGNALGKFPGPLLDARQALRTVRKNASSL
GIAPLRIGVMGFSAGGHLAAMASTLWNRTLPEEAENPLKNISARPDFSMFIYPVITMAPHTTHGGTRNKILGAHPSPALE
EMCSAERQVTEQAPPVFLVHALDDGVSCANSRLMEQACREKGVPASLNFYPTGGHGYGMEKRGHPTDQWPEAAEQWLREQ
GFLSSPSSARGGAPSGAGTSSGTRRE
>Mature_346_residues
MNKKQILLSALFLTFACASAGAAPPEPSALGAFCPPSEGKAFHSGWISLGLKAADLKEKQASAGHITDVGEAQIQLHFPA
GWSPQDRRTALCIFPGGGYAIQAIEKEGSRIAGWAAEHGMVGVVVKYRVSGTGNALGKFPGPLLDARQALRTVRKNASSL
GIAPLRIGVMGFSAGGHLAAMASTLWNRTLPEEAENPLKNISARPDFSMFIYPVITMAPHTTHGGTRNKILGAHPSPALE
EMCSAERQVTEQAPPVFLVHALDDGVSCANSRLMEQACREKGVPASLNFYPTGGHGYGMEKRGHPTDQWPEAAEQWLREQ
GFLSSPSSARGGAPSGAGTSSGTRRE

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 36533; Mature: 36533

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQILLSALFLTFACASAGAAPPEPSALGAFCPPSEGKAFHSGWISLGLKAADLKEKQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
ASAGHITDVGEAQIQLHFPAGWSPQDRRTALCIFPGGGYAIQAIEKEGSRIAGWAAEHGM
CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHCCCEEECCHHHCCC
VGVVVKYRVSGTGNALGKFPGPLLDARQALRTVRKNASSLGIAPLRIGVMGFSAGGHLAA
EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCHHHH
MASTLWNRTLPEEAENPLKNISARPDFSMFIYPVITMAPHTTHGGTRNKILGAHPSPALE
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCEECCCCCHHHH
EMCSAERQVTEQAPPVFLVHALDDGVSCANSRLMEQACREKGVPASLNFYPTGGHGYGME
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
KRGHPTDQWPEAAEQWLREQGFLSSPSSARGGAPSGAGTSSGTRRE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKKQILLSALFLTFACASAGAAPPEPSALGAFCPPSEGKAFHSGWISLGLKAADLKEKQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
ASAGHITDVGEAQIQLHFPAGWSPQDRRTALCIFPGGGYAIQAIEKEGSRIAGWAAEHGM
CCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEHHCCCEEECCHHHCCC
VGVVVKYRVSGTGNALGKFPGPLLDARQALRTVRKNASSLGIAPLRIGVMGFSAGGHLAA
EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCEEEEEEEECCCCHHHH
MASTLWNRTLPEEAENPLKNISARPDFSMFIYPVITMAPHTTHGGTRNKILGAHPSPALE
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCEECCCCCHHHH
EMCSAERQVTEQAPPVFLVHALDDGVSCANSRLMEQACREKGVPASLNFYPTGGHGYGME
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
KRGHPTDQWPEAAEQWLREQGFLSSPSSARGGAPSGAGTSSGTRRE
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]