| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is yqgC [H]
Identifier: 187734697
GI number: 187734697
Start: 232044
End: 232547
Strand: Direct
Name: yqgC [H]
Synonym: Amuc_0184
Alternate gene names: 187734697
Gene position: 232044-232547 (Clockwise)
Preceding gene: 187734691
Following gene: 187734698
Centisome position: 8.71
GC content: 60.52
Gene sequence:
>504_bases ATGCCCCATCTCCTTTCGGAAACCCTCGTCTGGTGCGTCACCCTGCTGTTATTCGGCATGGGGCTGATCGGCACGCTCAT CCCCATGCTTCCCGGCATTATGATCATTGCGGCCGGGTGCGTCTGGCAGGGAGTCATGGGCAGAGAAAACCTGGCGTGGT GGGAATGGACCGTCCTGGCGCTGCTGGTGGCGGGAGGCATGGTCATTGACAAGCTTTCCGGAGGCATGGGCGCCAAAAAA TTCGGCAGCACTGCCGCCGGCATCTGGGGAGCCATCATCGGCGCCGTCGCGGGGAGCCTCCTTTTCTCCCCCATTACGGG CCTTTTGTTCATGCCGTTCCTGGGGGCGCTGCTGGCGGAACTTATCTTTGCCAGAAAGGATATCATGAACGCTTTCAGGG CCGGGTCCGGAGCGGCGCTTGGGATGCTTGCCGGTCTGCTGCTGGAATTTACCTGCGGCCTGCTCATCATCGCCTGGTTC TGTTCCTGCTGCTTCCTGTTTTGA
Upstream 100 bases:
>100_bases AACCGCAATAATAATTTCTCCCCCTTTTTTCCTTTCTTCGTCATCCGCAAGCCGGGCAGAAACCTTGCCACCTGTCCGGC TTCCTGATAAAAAGGAAAGC
Downstream 100 bases:
>100_bases TGCCGCGCCCGGCGGAAGTTTCCGGCAGGAAAAGCAGACATTTTTCTGCTGCTGAAAAAAACACAGTTTCCCCAACGTAT TCAGTTAAACGCCGCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPHLLSETLVWCVTLLLFGMGLIGTLIPMLPGIMIIAAGCVWQGVMGRENLAWWEWTVLALLVAGGMVIDKLSGGMGAKK FGSTAAGIWGAIIGAVAGSLLFSPITGLLFMPFLGALLAELIFARKDIMNAFRAGSGAALGMLAGLLLEFTCGLLIIAWF CSCCFLF
Sequences:
>Translated_167_residues MPHLLSETLVWCVTLLLFGMGLIGTLIPMLPGIMIIAAGCVWQGVMGRENLAWWEWTVLALLVAGGMVIDKLSGGMGAKK FGSTAAGIWGAIIGAVAGSLLFSPITGLLFMPFLGALLAELIFARKDIMNAFRAGSGAALGMLAGLLLEFTCGLLIIAWF CSCCFLF >Mature_166_residues PHLLSETLVWCVTLLLFGMGLIGTLIPMLPGIMIIAAGCVWQGVMGRENLAWWEWTVLALLVAGGMVIDKLSGGMGAKKF GSTAAGIWGAIIGAVAGSLLFSPITGLLFMPFLGALLAELIFARKDIMNAFRAGSGAALGMLAGLLLEFTCGLLIIAWFC SCCFLF
Specific function: Unknown
COG id: COG2839
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007403 [H]
Pfam domain/function: PF04306 DUF456 [H]
EC number: NA
Molecular weight: Translated: 17588; Mature: 17457
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLLSETLVWCVTLLLFGMGLIGTLIPMLPGIMIIAAGCVWQGVMGRENLAWWEWTVLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLVAGGMVIDKLSGGMGAKKFGSTAAGIWGAIIGAVAGSLLFSPITGLLFMPFLGALLAE HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFARKDIMNAFRAGSGAALGMLAGLLLEFTCGLLIIAWFCSCCFLF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PHLLSETLVWCVTLLLFGMGLIGTLIPMLPGIMIIAAGCVWQGVMGRENLAWWEWTVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LLVAGGMVIDKLSGGMGAKKFGSTAAGIWGAIIGAVAGSLLFSPITGLLFMPFLGALLAE HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFARKDIMNAFRAGSGAALGMLAGLLLEFTCGLLIIAWFCSCCFLF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]