| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734674
Identifier: 187734674
GI number: 187734674
Start: 199559
End: 200563
Strand: Direct
Name: 187734674
Synonym: Amuc_0161
Alternate gene names: NA
Gene position: 199559-200563 (Clockwise)
Preceding gene: 187734673
Following gene: 187734675
Centisome position: 7.49
GC content: 55.02
Gene sequence:
>1005_bases ATGAAACAGAAACTTAAACCGGAAACCTGGGTAGGCATCTTTCTGATCGCCGGGATCCTGATGATTATCGGAGTCATCCT GGGATTCGGCAACATCAAAACATCCAAGGAGCAAACCTACCCCATCAACATCATTTTCAAAGATGCGGCGGGGCTCATCA AGGATTCCCAGATACGCCTGGGCGGCGTCACGGTGGGGAAAGTCACCAAAGCCCCTGAACTCCTGCCTTCCGGCAATGAA GTCATGCTGGAAGCCAGCATTCAGAGCGACGTGAAAATCCAGCAAGGGTCCGTCTTCCGGGTGGACATGCAGAACATCCT GGGCGACAAATACATCGATATCGTCCCTCCGGCCCAGCCCACGCATGAATACATCCTTCCCCATGCCACCATCATCGGTC AGCCGGAAAGCGATTTCAGCAAAATCAAAAACAATGCCGTGGGCGCCACAGAGGAAATCCTGAAAATCCTCAAGCAAATC GAGAAAAATTCGGACAACATTGACGACGCCATCCTCAATATCGGAGAGGCGGCCAAAGGGCTGGCCCAGACGACCAGGCT GATCAACGAGGGCATCCTGAACCGGGAGAACATCCAGAACCTCGGCAGCGTACTGTCTCAAATAAACCGGGCGGGAGAAC AGCTCCCCGGCCTCATGGAAGAAACGCGCTCCTCGGTCGCGGCCATGAAAGACACCGTCCGGGATGCCCGCAAACTCATT GCCGGAGCTGAAGAAAAGCTCAACACTCTGGACCCCGCCGTCAAGGCAATCCCCCCTACGCTGGCCGCTCTGAGGAAAGC ATCTGAACAAATCTCCTCCTTCACGGCTGATGCACGTAAAAACCAGGGCTTTCTTGGGCTGCTTATGTACGATGCTCGCT TCCGGGCCAACGCTCAGGAATTCATCCGCAATCTGAGGGATTACGGCATTCTGAGGTACCGGAATCCTAACGAACCCCAA GTCAAACCGGACCCCCGCGGCGGTTTTTCAGGAAGCCGCCGCTGA
Upstream 100 bases:
>100_bases AAACTGGGCAGCCCTGTCCGGCAAAAATGAAAACTTCCAACGGGTTCTGCTGGAACGGGCGGAACGGGAACGCAAACAAT AACCATCTTGCCACAGAGCC
Downstream 100 bases:
>100_bases GAGACCGCACAATTCCGGGTGAAGCCGCTTTACACACTTGCCAATAGTGGGAAGCGTGCTAAATAATTTCCAATGTGAGA GGCGAAAACATGTAAGTCGA
Product: Mammalian cell entry related domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKDAAGLIKDSQIRLGGVTVGKVTKAPELLPSGNE VMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPAQPTHEYILPHATIIGQPESDFSKIKNNAVGATEEILKILKQI EKNSDNIDDAILNIGEAAKGLAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRSSVAAMKDTVRDARKLI AGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGLLMYDARFRANAQEFIRNLRDYGILRYRNPNEPQ VKPDPRGGFSGSRR
Sequences:
>Translated_334_residues MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKDAAGLIKDSQIRLGGVTVGKVTKAPELLPSGNE VMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPAQPTHEYILPHATIIGQPESDFSKIKNNAVGATEEILKILKQI EKNSDNIDDAILNIGEAAKGLAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRSSVAAMKDTVRDARKLI AGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGLLMYDARFRANAQEFIRNLRDYGILRYRNPNEPQ VKPDPRGGFSGSRR >Mature_334_residues MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKDAAGLIKDSQIRLGGVTVGKVTKAPELLPSGNE VMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPAQPTHEYILPHATIIGQPESDFSKIKNNAVGATEEILKILKQI EKNSDNIDDAILNIGEAAKGLAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRSSVAAMKDTVRDARKLI AGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGLLMYDARFRANAQEFIRNLRDYGILRYRNPNEPQ VKPDPRGGFSGSRR
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36653; Mature: 36653
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKDAAGLIKDSQIRL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GGVTVGKVTKAPELLPSGNEVMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPAQP CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCEEEEEHHHHCCCCCEEECCCCCC THEYILPHATIIGQPESDFSKIKNNAVGATEEILKILKQIEKNSDNIDDAILNIGEAAKG CHHHHCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRSSVAAMKDTVRDARKLI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGLLMYDARFRANAQE HCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCHHH FIRNLRDYGILRYRNPNEPQVKPDPRGGFSGSRR HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKDAAGLIKDSQIRL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GGVTVGKVTKAPELLPSGNEVMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPAQP CCEEECCCCCCCCCCCCCCEEEEEECCCCCCEECCCCEEEEEHHHHCCCCCEEECCCCCC THEYILPHATIIGQPESDFSKIKNNAVGATEEILKILKQIEKNSDNIDDAILNIGEAAKG CHHHHCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRSSVAAMKDTVRDARKLI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGLLMYDARFRANAQE HCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCHHH FIRNLRDYGILRYRNPNEPQVKPDPRGGFSGSRR HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA