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The map label for this gene is yaeB [H]

Identifier: 187734624

GI number: 187734624

Start: 138287

End: 138973

Strand: Reverse

Name: yaeB [H]

Synonym: Amuc_0110

Alternate gene names: 187734624

Gene position: 138973-138287 (Counterclockwise)

Preceding gene: 187734625

Following gene: 187734623

Centisome position: 5.22

GC content: 60.41

Gene sequence:

>687_bases
TTGCAGCCCGTCGCCCGCGTCAGCACGTGTTATCCGGACAAATTCGGTGCGCCGCGCCAGAGCGGCCTGGTTCCGGATGC
GCGGGCGCGGCTGGTATTTGAGCCGCCGTTCCGCCATCCGGATGCCGTTCGTGGTCTGGAAGGGTTTTCCCATCTGTGGC
TGGTCTGGGTGTTCAGTGAAAACGTGGATAAGGGGTGGAGCCCTACGGTCCGGCCTCCGCGGCTGGGGGGCAATGTGCGC
ATGGGGGTGTTCGCCACGCGTGCGCCGTTCCGTCCCAATCCCATCGGGTTGTCTGCCGTCAGGCTGGAACGGGTGGAATT
GCATCCTCTGGACGGCCCGGTATTGCATCTTTCCGGCGTGGATTTGGTGGATGGCACCCCCATTCTGGATATCAAGCCCT
ATGTTCCTCTGGCGGACTGCATTCCGGAGGCGTCGGAAGGGTTTACGGCTGTCCCCTATGAACGGCTGGATGTGGAAATT
CCCGAATCTTTTGGCGATTCCATGTCTCCGGAAGAGAGGAGTGCACTGGAAGATACGCTGTCCCTGGATCCCCGTCCCCA
GTATCAGGATGATCCGGAACGGGTTTACGGCCTTTTGTTCTCTGGCTGGGAGGTGAAATTCAAGGTAGAGGGAAAGCGGC
TGTGCGTATTGTCCCTGGAAAGGAGGCGAAGCGGTTCCGGCCTTTGA

Upstream 100 bases:

>100_bases
AAGTGGATGCCGTGGTGTTCGGAGAACAGCTCCACCGCTTCTGATGAAAGCGTCACGGAGAAAGGCCGGCAGCTATTAAT
TATTAACTATCAGTCTCCGC

Downstream 100 bases:

>100_bases
TTTATTTTTACTGGTGAGGCCAACGTGTTTTTCACGCGCTCTGTCATTCTGATTCCGCTTGACTTGCGTCCGGATAAAGA
GTACCTATCGGTACATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQPVARVSTCYPDKFGAPRQSGLVPDARARLVFEPPFRHPDAVRGLEGFSHLWLVWVFSENVDKGWSPTVRPPRLGGNVR
MGVFATRAPFRPNPIGLSAVRLERVELHPLDGPVLHLSGVDLVDGTPILDIKPYVPLADCIPEASEGFTAVPYERLDVEI
PESFGDSMSPEERSALEDTLSLDPRPQYQDDPERVYGLLFSGWEVKFKVEGKRLCVLSLERRRSGSGL

Sequences:

>Translated_228_residues
MQPVARVSTCYPDKFGAPRQSGLVPDARARLVFEPPFRHPDAVRGLEGFSHLWLVWVFSENVDKGWSPTVRPPRLGGNVR
MGVFATRAPFRPNPIGLSAVRLERVELHPLDGPVLHLSGVDLVDGTPILDIKPYVPLADCIPEASEGFTAVPYERLDVEI
PESFGDSMSPEERSALEDTLSLDPRPQYQDDPERVYGLLFSGWEVKFKVEGKRLCVLSLERRRSGSGL
>Mature_228_residues
MQPVARVSTCYPDKFGAPRQSGLVPDARARLVFEPPFRHPDAVRGLEGFSHLWLVWVFSENVDKGWSPTVRPPRLGGNVR
MGVFATRAPFRPNPIGLSAVRLERVELHPLDGPVLHLSGVDLVDGTPILDIKPYVPLADCIPEASEGFTAVPYERLDVEI
PESFGDSMSPEERSALEDTLSLDPRPQYQDDPERVYGLLFSGWEVKFKVEGKRLCVLSLERRRSGSGL

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=140, Percent_Identity=42.8571428571429, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI1786393, Length=231, Percent_Identity=41.5584415584416, Blast_Score=183, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24586408, Length=144, Percent_Identity=43.0555555555556, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI45552503, Length=144, Percent_Identity=43.0555555555556, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 25401; Mature: 25401

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPVARVSTCYPDKFGAPRQSGLVPDARARLVFEPPFRHPDAVRGLEGFSHLWLVWVFSE
CCCHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEEEEEEEC
NVDKGWSPTVRPPRLGGNVRMGVFATRAPFRPNPIGLSAVRLERVELHPLDGPVLHLSGV
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCC
DLVDGTPILDIKPYVPLADCIPEASEGFTAVPYERLDVEIPESFGDSMSPEERSALEDTL
EEECCCCEEEECCCCCHHHHCCCCCCCCEECCHHHCEEECCHHCCCCCCCHHHHHHHHHH
SLDPRPQYQDDPERVYGLLFSGWEVKFKVEGKRLCVLSLERRRSGSGL
CCCCCCCCCCCHHHHHEEEECCEEEEEEECCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MQPVARVSTCYPDKFGAPRQSGLVPDARARLVFEPPFRHPDAVRGLEGFSHLWLVWVFSE
CCCHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEEEEEEEC
NVDKGWSPTVRPPRLGGNVRMGVFATRAPFRPNPIGLSAVRLERVELHPLDGPVLHLSGV
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCC
DLVDGTPILDIKPYVPLADCIPEASEGFTAVPYERLDVEIPESFGDSMSPEERSALEDTL
EEECCCCEEEECCCCCHHHHCCCCCCCCEECCHHHCEEECCHHCCCCCCCHHHHHHHHHH
SLDPRPQYQDDPERVYGLLFSGWEVKFKVEGKRLCVLSLERRRSGSGL
CCCCCCCCCCCHHHHHEEEECCEEEEEEECCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]