Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734561

Identifier: 187734561

GI number: 187734561

Start: 62461

End: 63240

Strand: Reverse

Name: 187734561

Synonym: Amuc_0045

Alternate gene names: NA

Gene position: 63240-62461 (Counterclockwise)

Preceding gene: 187734562

Following gene: 187734555

Centisome position: 2.37

GC content: 47.31

Gene sequence:

>780_bases
ATGAATTTCTTTCCTCATATTCCCATGTTGTCCACTGTATTCAACAATATAGGTTGCTATTTATTGCCGTTCGGAGTTGT
TTTGCTGTGGCTTTTGTATGAGTCAAAAAAAGTAAAGACCATCCTTCTTGCCGCGCTGGTGCTTTTGAGCATGGTATGCA
TGTTTTTCCATGAAGCCTTCGCTCCCAGCAGGGAATATCCGTGGGACTGCATGGTGGAGCATATTTTTACGGGAACGCTT
CTGCCTTTCCTTTGCCTGCTGGGATATCTTCTGTACGTGTTTCTTTGTACCTGCATTCCTGTTTACCGGAAGGTATGGAA
GGGCATCGGTTTTTTCGTTCTTGGAGGAATGAGCCTGGCTTTTGAGTACGTGAATGTGTTCTTCCCGGTGGCGCTGCTGG
CGGGTTATTTATTCCGTTTCACCATTTTCCGGAAATTCAGGAATCACCTTCCCCTGGTCAGGAAATGTCACGGGGTTCTT
GCCGTAGGGGTCATTCCGGGAATCTGTCTGATCGGTGTTGTCAGCGCCATTCTGTTTCCTCCTCCGGAGAGCTTTATATG
CGACAGGATTCATGAGGAAATGGAGCGTGACATGGCTTTGTGGAATTACCAGAGCAATCTGGTACTGCTGTCCAGCCGTT
TTCTTAATATGGAACGCGAAAACGGCTGTATTACCGTAAAGTACTATTGCGAAACGAATATGGGCCCTGCCGTGTACAAG
GCGTTCTGCAATAATTACGGCGGTTATGTGCGGGCGGAATGTTCCCTGCTGAACAGATAA

Upstream 100 bases:

>100_bases
TTTGAAAACGAGTGTTTGAATTTATTTTATTTCCAATTATTGTTGCTGAAGCCGCTGCTGCGTTTTAGTTGTTAACCGCT
CATTCATCCGTATCCGCTCC

Downstream 100 bases:

>100_bases
TTTCCCTGATGGGAAGGAGTCCGCCTTTTCAGGTCGAAGCTGTTTAGATCTGAATGTCTCCGGTGAACACAAGGTCTGCC
GGTCCGGTCAGCGTGACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNFFPHIPMLSTVFNNIGCYLLPFGVVLLWLLYESKKVKTILLAALVLLSMVCMFFHEAFAPSREYPWDCMVEHIFTGTL
LPFLCLLGYLLYVFLCTCIPVYRKVWKGIGFFVLGGMSLAFEYVNVFFPVALLAGYLFRFTIFRKFRNHLPLVRKCHGVL
AVGVIPGICLIGVVSAILFPPPESFICDRIHEEMERDMALWNYQSNLVLLSSRFLNMERENGCITVKYYCETNMGPAVYK
AFCNNYGGYVRAECSLLNR

Sequences:

>Translated_259_residues
MNFFPHIPMLSTVFNNIGCYLLPFGVVLLWLLYESKKVKTILLAALVLLSMVCMFFHEAFAPSREYPWDCMVEHIFTGTL
LPFLCLLGYLLYVFLCTCIPVYRKVWKGIGFFVLGGMSLAFEYVNVFFPVALLAGYLFRFTIFRKFRNHLPLVRKCHGVL
AVGVIPGICLIGVVSAILFPPPESFICDRIHEEMERDMALWNYQSNLVLLSSRFLNMERENGCITVKYYCETNMGPAVYK
AFCNNYGGYVRAECSLLNR
>Mature_259_residues
MNFFPHIPMLSTVFNNIGCYLLPFGVVLLWLLYESKKVKTILLAALVLLSMVCMFFHEAFAPSREYPWDCMVEHIFTGTL
LPFLCLLGYLLYVFLCTCIPVYRKVWKGIGFFVLGGMSLAFEYVNVFFPVALLAGYLFRFTIFRKFRNHLPLVRKCHGVL
AVGVIPGICLIGVVSAILFPPPESFICDRIHEEMERDMALWNYQSNLVLLSSRFLNMERENGCITVKYYCETNMGPAVYK
AFCNNYGGYVRAECSLLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29742; Mature: 29742

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFPHIPMLSTVFNNIGCYLLPFGVVLLWLLYESKKVKTILLAALVLLSMVCMFFHEAF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
APSREYPWDCMVEHIFTGTLLPFLCLLGYLLYVFLCTCIPVYRKVWKGIGFFVLGGMSLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FEYVNVFFPVALLAGYLFRFTIFRKFRNHLPLVRKCHGVLAVGVIPGICLIGVVSAILFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPESFICDRIHEEMERDMALWNYQSNLVLLSSRFLNMERENGCITVKYYCETNMGPAVYK
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCEEEEEEEEECCCCHHHHH
AFCNNYGGYVRAECSLLNR
HHHHCCCCEEEHHHHHCCC
>Mature Secondary Structure
MNFFPHIPMLSTVFNNIGCYLLPFGVVLLWLLYESKKVKTILLAALVLLSMVCMFFHEAF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
APSREYPWDCMVEHIFTGTLLPFLCLLGYLLYVFLCTCIPVYRKVWKGIGFFVLGGMSLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FEYVNVFFPVALLAGYLFRFTIFRKFRNHLPLVRKCHGVLAVGVIPGICLIGVVSAILFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPESFICDRIHEEMERDMALWNYQSNLVLLSSRFLNMERENGCITVKYYCETNMGPAVYK
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCEEEEEEEEECCCCHHHHH
AFCNNYGGYVRAECSLLNR
HHHHCCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA