| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is csgE [H]
Identifier: 187734243
GI number: 187734243
Start: 2081962
End: 2082084
Strand: Direct
Name: csgE [H]
Synonym: SbBS512_E2290
Alternate gene names: 187734243
Gene position: 2081962-2082084 (Clockwise)
Preceding gene: 187733658
Following gene: 187730142
Centisome position: 45.1
GC content: 40.65
Gene sequence:
>123_bases TTGAAAAGAGACTTCGAGAAAACTGTCGTCTTTGCACTGATTCAAACTGAAGAAGCACTAAATCGTCGCCAGATAAATCA GGCGTTATTAAGTACGGGCGATTTGGCGCATGATGAATTCTAA
Upstream 100 bases:
>100_bases GGGTAACTTAACGATTAATGAAAGGCCCAGTGCACGATGGGGAAGCTGGATCACTATAACGGTCAATCAGGACGTTATTT TCCAGACTTTTTTATTTCCG
Downstream 100 bases:
>100_bases ATAAAAAATTGTTCGGAGGCTGCAATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGC TGGAACCATGACTTTCCAGT
Product: curli production assembly/transport component CsgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF
Sequences:
>Translated_40_residues MKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF >Mature_40_residues MKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787276, Length=40, Percent_Identity=97.5, Blast_Score=82, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018900 [H]
Pfam domain/function: PF10627 CsgE [H]
EC number: NA
Molecular weight: Translated: 4649; Mature: 4649
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]