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The map label for this gene is xerC [H]

Identifier: 187734150

GI number: 187734150

Start: 1759131

End: 1760258

Strand: Reverse

Name: xerC [H]

Synonym: SbBS512_E1917

Alternate gene names: 187734150

Gene position: 1760258-1759131 (Counterclockwise)

Preceding gene: 187730597

Following gene: 187731259

Centisome position: 38.13

GC content: 49.65

Gene sequence:

>1128_bases
ATGAGGCTGCTGGGCAGATCAGTCCCTCTCTCTCCCCTGATGGGCCAGAAAACACATCGTCTTCTCAAAAATCCCGCAAG
ACTGGTACACAGCCCGGCTAATCATAGAACGCTGGGGGCATGGTGGTCTTGTAACGCTGGGGTTTCACGAATGAGCATAA
AATCAATTCTGGGAGGGTATCTTCTTGACATGTGCCCTGAGGGGCGTAAAGGCAAACGCATTCGCAAAAAATTTAAAACG
AAATCGGATGCAGTTTTATATGAGCGGTGGGTGCTGGCGCAACAGCATAACAATGAGTGGAAAGGAAACTCTATTGATCG
CCGTCCTCTGTCAGTGCTTATTGACTTGTGGTGGAAATACCACGGCCAGCTAATGAAGTCAGGGCATAACACGCGCCTTA
AATTGCTGCGCTTGAGTGAAGCAATGGATGACCCGTGCGTGCATAAACTTAATACAACGATGCTCACCGAGCTACGTGTG
TCCAGGATAGAGCAGGGGATACAGCCCAGCACCATAAATCGAGAGATTGGGGCGTTAAGCGCGATGTTTACCGCACTCAT
CTCATCCGGCCATTTTCTTAACGATAACCCCGTTCAAGGCCTTAAAGGAATGAAGGTTAAGGAGCGCGAAATGGGATATC
TGAGTAAGTCTGAATGTGTTCAGTTGCTGGATGCACTGGCTGAAAATCCCGATGAACGACTGGCTGTCGAAATCCTTCTG
TCGACCGGGGCGCGATGGGGCGAGGTAGCGGCACTGGAGCAGCGCCGTGTTCTTCATTGTCGAATCACTTTTTCAAAAAC
GAAGAACAGCAAAAACCGTACCGTTCCTATTTCTGAAAGCCTGTTTGAAAAGATCAAAAAACGGGGCGGGAAACTGGTGT
TTCCGACGCTGGATTATTCATTGGTTCGCGATGTCATCAAAACGGTCGCACCTGATGTTCCTGACGGCCAGGCTGTTCAT
GCGCTGCACCACACCTTCGCCAGTCATTTCATGATGAACGGCGGCAATATTCTGACGCTCCAGAAAATTCTGGGGCACGC
AAAGATTCAGACAACGATGATTTATGCCCATCTTGCGCCGGATTACCTGCAGGATGCGGTGAGGTTTAATCCACTAGGAG
GTGCTTAA

Upstream 100 bases:

>100_bases
ACGGGGCGGATTGAAAACATAGGGGGCGAAGTGCTTATCAAGATTGTTAATCACCCTCGCTTTTTTAAGTACATGAATTG
GCTTATGACGGGAAAAACAA

Downstream 100 bases:

>100_bases
GAGTGAAGTTTCATTTAGATGAACTTAAAAGAATGGCAACGCTCGATAATTTTGCGCGTTTTCTCAATGAGTCGTCTACG
AATGAAAAATGTTTGTCGTG

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGYLLDMCPEGRKGKRIRKKFKT
KSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKYHGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRV
SRIEQGIQPSTINREIGALSAMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILL
STGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYSLVRDVIKTVAPDVPDGQAVH
ALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAPDYLQDAVRFNPLGGA

Sequences:

>Translated_375_residues
MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGYLLDMCPEGRKGKRIRKKFKT
KSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKYHGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRV
SRIEQGIQPSTINREIGALSAMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILL
STGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYSLVRDVIKTVAPDVPDGQAVH
ALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAPDYLQDAVRFNPLGGA
>Mature_375_residues
MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGYLLDMCPEGRKGKRIRKKFKT
KSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKYHGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRV
SRIEQGIQPSTINREIGALSAMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILL
STGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYSLVRDVIKTVAPDVPDGQAVH
ALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAPDYLQDAVRFNPLGGA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42219; Mature: 42219

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGY
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEECEEEECCCCHHHHHHHHHHHHH
LLDMCPEGRKGKRIRKKFKTKSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKY
HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRVSRIEQGIQPSTINREIGALS
HHHHHHCCCCCHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
STGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYS
HCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHH
LVRDVIKTVAPDVPDGQAVHALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHEEEEEHHCH
DYLQDAVRFNPLGGA
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLLGRSVPLSPLMGQKTHRLLKNPARLVHSPANHRTLGAWWSCNAGVSRMSIKSILGGY
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCEECEEEECCCCHHHHHHHHHHHHH
LLDMCPEGRKGKRIRKKFKTKSDAVLYERWVLAQQHNNEWKGNSIDRRPLSVLIDLWWKY
HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HGQLMKSGHNTRLKLLRLSEAMDDPCVHKLNTTMLTELRVSRIEQGIQPSTINREIGALS
HHHHHHCCCCCHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AMFTALISSGHFLNDNPVQGLKGMKVKEREMGYLSKSECVQLLDALAENPDERLAVEILL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
STGARWGEVAALEQRRVLHCRITFSKTKNSKNRTVPISESLFEKIKKRGGKLVFPTLDYS
HCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHH
LVRDVIKTVAPDVPDGQAVHALHHTFASHFMMNGGNILTLQKILGHAKIQTTMIYAHLAP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHEEEEEHHCH
DYLQDAVRFNPLGGA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA