Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is yobH [H]

Identifier: 187734137

GI number: 187734137

Start: 1901746

End: 1901985

Strand: Direct

Name: yobH [H]

Synonym: SbBS512_E2094

Alternate gene names: 187734137

Gene position: 1901746-1901985 (Clockwise)

Preceding gene: 187731304

Following gene: 187734204

Centisome position: 41.2

GC content: 43.33

Gene sequence:

>240_bases
ATGCGATTCATCATTCGCACAGTTATGCTGATAGCACTGGTATGGATAGGATTATTACTCAGCGGATATGGCGTTTTGAT
TGGAAGCAAAGAGAATGCCGCAGGATTAGGTTTGCAATGTACCTATCTGACTGCCAGAGGCACCAGCACGGTACAATACT
TGCACACTAAAAATGGTTTCTTGGGGATAACAGATTGCCCACTGTTACGTAAAAGCAATATCGTGGCCGATAATGGTTAA

Upstream 100 bases:

>100_bases
GCCTAACTATGTCGATATTCGTGCTTTTTCGGAATGAGTAGCTTGCTTCAGCGCATATTGCCGCTACGATTAAGCGAACA
TAAAAAGAGAAGAGGTTGTA

Downstream 100 bases:

>100_bases
GGGTAATAAATAACCAGATTCTCACTCATGAGTAAAATATTCTTATAGCAAGCGCGTTTAATATAACGCACCTTCAACTT
TATTTTTCTCATGCTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKNGFLGITDCPLLRKSNIVADNG

Sequences:

>Translated_79_residues
MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKNGFLGITDCPLLRKSNIVADNG
>Mature_79_residues
MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKNGFLGITDCPLLRKSNIVADNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081982, Length=79, Percent_Identity=97.4683544303797, Blast_Score=156, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8513; Mature: 8513

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKNGF
CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCE
LGITDCPLLRKSNIVADNG
EECCCCCCCCCCCEEECCC
>Mature Secondary Structure
MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKNGF
CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCE
LGITDCPLLRKSNIVADNG
EECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]