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The map label for this gene is cvpA

Identifier: 187734045

GI number: 187734045

Start: 2491604

End: 2492092

Strand: Reverse

Name: cvpA

Synonym: SbBS512_E2691

Alternate gene names: 187734045

Gene position: 2492092-2491604 (Counterclockwise)

Preceding gene: 187732517

Following gene: 187730760

Centisome position: 53.99

GC content: 49.28

Gene sequence:

>489_bases
ATGGTCTGGATTGATTACGCCATAATCGCGGTGATTGCTTTTTCCTCTCTGGTTAGCCTGATCCGCGGCTTTGTTCGTGA
AGCGTTATCGCTGGTGACATGGGGTTGTGCTTTCTTTGTTGCCAGTCATTACTACACTTACCTGTCAGTCTGGTTTACGG
GCTTTGAAGACGAACTGGTTCGAAATGGAATTGCCATCGCGGTACTGTTTATCGCTACCCTGATCGTTGGTGCTATCGTG
AACTTCGTGATAGGCCAGTTGGTGGAGAAAACGGGGTTGTCAGGCACCGATCGGGTGCTGGGCGTCTGTTTCGGTGCGTT
GCGCGGTGTGTTGATTGTTGCCGCCATTCTCTTCTTTCTCGACTCCTTTACCGGGGTGTCGAAAAGCGAAGACTGGAGCA
AATCACAGCTGATCCCGCAGTTCAGTTTTATCATCAGATGTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCC
AGAGCGTAA

Upstream 100 bases:

>100_bases
TTTATTGATGCGTGGGAAGGAAATCCCTACGCAAACGTTTTCTTTTTCTGTTAGAATGCGCCCCGAACAGGATGACAGGG
CGTAAAATCGTGGGACACAT

Downstream 100 bases:

>100_bases
GTGCTCTGAGATGTGGCTTAACGAGGAAAAAGACGTATGTGCGGTATTGTCGGTATCGCCGGTGTTATGCCGGTTAACCA
GTCGATTTATGATGCCTTAA

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIV
NFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLP
RA

Sequences:

>Translated_162_residues
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIV
NFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLP
RA
>Mature_162_residues
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIV
NFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLP
RA

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=162, Percent_Identity=100, Blast_Score=318, Evalue=9e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CVPA_ECOLI (P08550)

Other databases:

- EMBL:   J01666
- EMBL:   M68934
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A29803
- RefSeq:   AP_002913.1
- RefSeq:   NP_416816.1
- ProteinModelPortal:   P08550
- DIP:   DIP-9354N
- MINT:   MINT-1289958
- STRING:   P08550
- EnsemblBacteria:   EBESCT00000004370
- EnsemblBacteria:   EBESCT00000004371
- EnsemblBacteria:   EBESCT00000016697
- GeneID:   945055
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2310
- KEGG:   eco:b2313
- EchoBASE:   EB0167
- EcoGene:   EG10169
- eggNOG:   COG1286
- GeneTree:   EBGT00050000010448
- HOGENOM:   HBG730383
- OMA:   AFFIASH
- ProtClustDB:   PRK10845
- BioCyc:   EcoCyc:EG10169-MONOMER
- Genevestigator:   P08550
- InterPro:   IPR003825

Pfam domain/function: PF02674 Colicin_V

EC number: NA

Molecular weight: Translated: 17907; Mature: 17907

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1eaafb7c)-; HASH(0x1f6ee39c)-; HASH(0x1fa9a928)-; HASH(0x1ea93f14)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
RNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
RNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219