| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is gltK
Identifier: 187733618
GI number: 187733618
Start: 568760
End: 569434
Strand: Direct
Name: gltK
Synonym: SbBS512_E0596
Alternate gene names: 187733618
Gene position: 568760-569434 (Clockwise)
Preceding gene: 187733686
Following gene: 187731121
Centisome position: 12.32
GC content: 49.78
Gene sequence:
>675_bases ATGTACGAGTTTGACTGGAGTTCCATTGTCCCTTCCCTGCCATATCTGCTCGACGGGCTGGTGATCACGCTGAAAATCAC CGTCACGGCAGTCGTGATTGGTATTTTGTGGGGCACCATGCTGGCGGTGATGCGCTTGTCCAGCTTTGCGCCCGTAGCGT GGTTTGCCAAAGCCTACGTTAACGTATTCCGCTCGATTCCTTTAGTTATGGTTTTGCTGTGGTTTTACCTGATCGTGCTA GGTTTTCTGCAAAACGTGCTGGGATTATCACCAAAAAATGATATCCGTTTAATTTCGGCGATGGTGGCGTTTTCGATGTT TGAAGCGGCCTACTATTCAGAGATTATCCGTGCTGGTATTCAAAGTATTTCTCGTGGTCAGTCGAGCGCCGCGCTGGCGT TGGGAATGACTCACTGGCAGTCGATGAAACTGATTATTCTGCCGCAGGCGTTCCGCGCGATGGTGCCGCTTCTGCTCACT CAGGGCATCGTACTGTTCCAGGATACCTCACTGGTGTATGTGTTATCTCTGGCCGATTTCTTCCGTACCGCCTCAACCAT TGGTGAGCGTGATGGTACGCAGGTTGAGATGATCCTGTTTGCCGGATTTGTTTATTTCGTTATTAGTCTTAGCGCGTCGT TGTTGGTCAGCTACTTGAAAAGAAGGACAGCATAA
Upstream 100 bases:
>100_bases CTATTACGCTGGCGTATGTGTTGATTAACGCGATTATCATGCTGGTAATGACGCTGGTTGAACGTAAAGTTCGCCTGCCT GGCAACATGGGGGGCAAATA
Downstream 100 bases:
>100_bases TGATTACCCTGAAAAATGTTTCAAAATGGTATGGTCACTTTCAGGTGCTGACCGACTGCTCAACCGAAGTGAAAAAAGGC GAAGTGGTGGTGGTTTGCGG
Product: glutamate/aspartate ABC transporter permease GltK
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVL GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA
Sequences:
>Translated_224_residues MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVL GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA >Mature_224_residues MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVL GFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=99.5535714285714, Blast_Score=439, Evalue=1e-125, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=37.3831775700935, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=31.25, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787030, Length=228, Percent_Identity=30.7017543859649, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=25.5813953488372, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=27.6497695852535, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI48994930, Length=124, Percent_Identity=35.4838709677419, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788646, Length=210, Percent_Identity=24.2857142857143, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788645, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=23.8317757009346, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24931; Mature: 24931
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYV CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NVFRSIPLVMVLLWFYLIVLGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF HHHHCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH FRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYV CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NVFRSIPLVMVLLWFYLIVLGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF HHHHCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH FRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]