| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ompG
Identifier: 187733557
GI number: 187733557
Start: 1414464
End: 1415369
Strand: Direct
Name: ompG
Synonym: SbBS512_E1552
Alternate gene names: 187733557
Gene position: 1414464-1415369 (Clockwise)
Preceding gene: 187732913
Following gene: 187732603
Centisome position: 30.64
GC content: 49.45
Gene sequence:
>906_bases ATGAAAAAGTTATTACCCTGTACCGCACTGGTGATGTGTGCGGGAATGGCCTGCGCACAGGCCGAGGAAAAGAACTACTG GCACTTTAATATCGGCGCGATGTACGAAATAGAAAACGTCGAGGGTTATGGCGAAGATATGGATGGGCTGGCGGAGCCTT CAGTCTATTTTAATGCCGCCAACGGGCCGTGGAGAATTGCTCTGGCCTATTATCAGGAAGGGCCGGTAGATTATAGCGCG GGTAAACGTGGAACGTGGTTTGATCGCCCGGAGCTGGAGGTGCATTATCAGTTCCTCGAAAACGATGATTTCAGTTTCGG CCTGACCGGCGGTTTCCGTAATTATGGTTATCACTACGTTGATGAACCGGGTAAAGACACGGCGAATATGCAGCGCTGGA AAATCGCGCCAGACTGGGATGTGAAACTGACTGACGATTTACGTTTCAACGGTTGGTTGTCGATGTATAAATTTGCCAAC CATCTGAACACTACCGGTTACGCTGATACCCGTGTCGAAACGGAAACAGGTCTGCAATATACCTTCAACGAAACGGTTGC CTTGCGAGTGAACTATTATCTCGAGCGCGGCTTCAATATGGACGACAGCCGCAATAACGGTGAGTTTTCCACGCAAGAAA TTCGCGCCTATTTGCCGCTGACGCTCGGCAACCACTCGTTGACGCCGTATACGCGCATTGGGCTGGATCGCTGGAGTAAC TGGGACTGGCAGGATGATATTGAATGTGAAGGCCATGATTTTAACCGTGTAGGTTTATTTTACGGTTATGATTTCCAGAA CGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATTATGCAG GTGTCGGCGTAAATTACTCGTTCTGA
Upstream 100 bases:
>100_bases TTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAAATACAGGGGGAAGGCATTCCCCCA GAATAATACAAGGAACAATA
Downstream 100 bases:
>100_bases TAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCG CATCCGGCATTCAGGCAAGG
Product: monomeric porin OmpG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN HLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSN WDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
Sequences:
>Translated_301_residues MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN HLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSN WDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF >Mature_301_residues MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSA GKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFAN HLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSN WDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
Specific function: May act as a regulator of the RCS-phosphorelay signal transduction pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787579, Length=301, Percent_Identity=98.3388704318937, Blast_Score=615, Evalue=1e-178,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011250 - InterPro: IPR018981 [H]
Pfam domain/function: PF09381 Porin_OmpG [H]
EC number: NA
Molecular weight: Translated: 34917; Mature: 34917
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA CCCCCHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECC NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYV CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHCCEEEC DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANHLNTTGYADTRVETETGLQY CCCCCCCCCCEEEEECCCCCEEEECCEEECHHHHHHHHHHHCCCCCCCCCEEECCCCCEE TFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSN EECCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCHHCCC WDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS CCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEC F C >Mature Secondary Structure MKKLLPCTALVMCAGMACAQAEEKNYWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA CCCCCHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEEECC NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYV CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCHHHCCEEEC DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANHLNTTGYADTRVETETGLQY CCCCCCCCCCEEEEECCCCCEEEECCEEECHHHHHHHHHHHCCCCCCCCCEEECCCCCEE TFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSLTPYTRIGLDRWSN EECCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCHHCCC WDWQDDIECEGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS CCCCCCCEECCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9721282; 9278503; 11758943 [H]