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The map label for this gene is arpB [H]

Identifier: 187733554

GI number: 187733554

Start: 1795961

End: 1796722

Strand: Direct

Name: arpB [H]

Synonym: SbBS512_E1962

Alternate gene names: 187733554

Gene position: 1795961-1796722 (Clockwise)

Preceding gene: 187732992

Following gene: 187732568

Centisome position: 38.91

GC content: 35.3

Gene sequence:

>762_bases
TTGCCCATACTCCCTGAAAAAGAAATCATTGAAATAATAACTGCGCAGAATAGCGTTGGTACACCTGCTTTATTTCTGGC
TATGATGAACGGACATACTGACAACGTAAAAATATTTATGCAAGAAATTCAGTCACTGATATACAATCATATCATTCATG
AAGATAATCTGGTTAAATTACTGCAAACTAAAAGTGCTAACGAAACACCTGGGCTCTATATCTCCATGTTGTATGGGTTC
GATGAAACAATCGATATCTTTCTGAATGCATTAACCACTCCAATAGCACAAGAGCTTTTAAACAAAAAAATAGTGATGGA
TATTTTAGCAATGAAAACACGTGATGGTGAACTAGGGTTGTTTGCTGCAATGGAAAATAATCACCCTTTGTGTGTCACAC
GGTTCCTCTCTAAAATTAATGGCATCGCCTTTAAATACAAGTTGAGCAAAGCTAACATCATGGATTTATTAAAAGGCGCT
ACAGCACATGGAACCCCTGTATTATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCTTATATATCGACGCT
GAATATTTTTGCAAAAAAATATTCTTTTAGTCAACGTCAGTTATTCACACTGTTGGCCGCTAAAAATCATGACAACATGT
CAGCTGTTCATATAGCCATTCATCATAATCATTATAAAACTGTAAAAACATATTATGCTGCTATAAATGTAATCAGCCAA
AGCCTGAGTTTTAGTGCTGATGAACTAAAGACGTATTTATAA

Upstream 100 bases:

>100_bases
TATTGCATCACGAATGCCATTTGCCCCTATACATCCATCGGCAATGTTGTTAATAATGGCCACAGGCCAGACTCAACAGC
TTATTACATTATTCAAACAG

Downstream 100 bases:

>100_bases
CCAACTATTGGTAATGCTGCCAACTTATTGGTTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCA
TCAGATGTCCTTCCTGCTCC

Product: ankyrin repeat protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPGLYISMLYGF
DETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGA
TAHGTPVLYIAMSKGNEDVVLSYISTLNIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQ
SLSFSADELKTYL

Sequences:

>Translated_253_residues
MPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPGLYISMLYGF
DETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGA
TAHGTPVLYIAMSKGNEDVVLSYISTLNIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQ
SLSFSADELKTYL
>Mature_252_residues
PILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPGLYISMLYGFD
ETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGAT
AHGTPVLYIAMSKGNEDVVLSYISTLNIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQS
LSFSADELKTYL

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=250, Percent_Identity=26, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 28387; Mature: 28255

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00447 DNA_POLYMERASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKL
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
LQTKSANETPGLYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGL
HHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVV
EEEECCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
LSYISTLNIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
SLSFSADELKTYL
HHCCCHHHHHHCC
>Mature Secondary Structure 
PILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKL
CCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
LQTKSANETPGLYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGL
HHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVV
EEEECCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
LSYISTLNIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVKTYYAAINVISQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
SLSFSADELKTYL
HHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]