| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187733506
Identifier: 187733506
GI number: 187733506
Start: 1571554
End: 1571745
Strand: Reverse
Name: 187733506
Synonym: SbBS512_E1734
Alternate gene names: NA
Gene position: 1571745-1571554 (Counterclockwise)
Preceding gene: 187733177
Following gene: 187732241
Centisome position: 34.05
GC content: 52.08
Gene sequence:
>192_bases GTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACT GCCGGACATCAGCGCTATCTCTGCTCTCATTGTCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGG TACGCACCAGAAAATCATTGATATGGCCATGA
Upstream 100 bases:
>100_bases GGTGAGAATGGGTTACATTATGATGAAATCATCAATAATATCACCACCAGCCCGGTAATGCTGCCAACTTACTGATTTAG TGTATGATGGTGATTTTAAG
Downstream 100 bases:
>100_bases ATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTCCGTCACTTAAAAAACTCAGGC CGCAGTCGGTAACCTCGCGC
Product: IS1 transposase orfA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIVVKHGNYSSLTPPLSPVRTRKSLIWP
Sequences:
>Translated_63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIVVKHGNYSSLTPPLSPVRTRKSLIWP >Mature_63_residues MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIVVKHGNYSSLTPPLSPVRTRKSLIWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6849; Mature: 6849
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIVVKHGNYSSLTPPLSPVRTRKSL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCEEEEEEECCCCCCCCCCCCCCCCCCCC IWP CCC >Mature Secondary Structure MLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIVVKHGNYSSLTPPLSPVRTRKSL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCEEEEEEECCCCCCCCCCCCCCCCCCCC IWP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA