| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is cas2
Identifier: 187733433
GI number: 187733433
Start: 2914157
End: 2914450
Strand: Direct
Name: cas2
Synonym: SbBS512_E3120
Alternate gene names: 187733433
Gene position: 2914157-2914450 (Clockwise)
Preceding gene: 187733988
Following gene: 187731887
Centisome position: 63.13
GC content: 48.98
Gene sequence:
>294_bases ATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCG TGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCG GAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCG GTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAA
Upstream 100 bases:
>100_bases CAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGC GGTCATCGAGGACGCGGCTG
Downstream 100 bases:
>100_bases GTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACA GTTATGTATGCTTAGTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIP VDLDGLRLVSFLPVDNQ
Sequences:
>Translated_97_residues MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIP VDLDGLRLVSFLPVDNQ >Mature_96_residues SMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPV DLDGLRLVSFLPVDNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=86.1702127659574, Blast_Score=163, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010152 [H]
Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]
EC number: NA
Molecular weight: Translated: 11004; Mature: 10873
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW CCEEEEEECCCCCHHCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE ATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ ECCCCCCCEEEECCCCCCCEEECCCEEEEEEECCCCC >Mature Secondary Structure SMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQITQLAGCGNVVMAW CEEEEEECCCCCHHCCEEEEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE ATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ ECCCCCCCEEEECCCCCCCEEECCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2656660; 9278503; 7567469 [H]