| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is hisB
Identifier: 187733376
GI number: 187733376
Start: 1116938
End: 1118005
Strand: Reverse
Name: hisB
Synonym: SbBS512_E1210
Alternate gene names: 187733376
Gene position: 1118005-1116938 (Counterclockwise)
Preceding gene: 187733922
Following gene: 187730914
Centisome position: 24.22
GC content: 54.03
Gene sequence:
>1068_bases ATGAGTCAGAAGTATCTTTTTATCGATCGCGATGGAACCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTT TGACAAACTCGCCTTTGAACCAGGCGTGATCCCGGAACTGCTGAAGCTGCAAAAAGCGGGCTATAAACTGGTGATGATCA CCAACCAGGATGGTCTGGGGACGCAAAGTTTCCCGCAGGCGAATTTCGATGGCCCGCACAACCTGATGATGCAGATCTTC ACCTCGCAAGGCGTGCAGTTTGATGAAGTGCTGATTTGCCCGCACCTGCCCGCCGATGAATGCGACTGCCGTAAGCCGAA AGTAAAACTGGTGGAGCGTTATCTCGCTGAGCAAGCGATGGATCGCGCCAACAGTTATGTGATTGGCGATCGCGCGACCG ACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAG CAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGA TCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTT TCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGC GAAGCGTTAAAAATTGCCCTCGGCGATAAACGCGGTATTTGTCGCTTTGGTTTTGTGCTACCGATGGACGAATGCCTTGC CCGCTGCGCGCTGGATATCTCTGGTCGCCCGCACCTGGAATATAAAGCCGAGTTTACCTACCAGCGCGTGGGCGATCTCA GCACCGAGATGATCGAGCACTTCTTCCGTTCGCTCTCTTACACCATGGGCGTGACGCTACACCTGAAAACCAAAGGTAAA AACGATCACCACCGTGTAGAGAGCCTGTTCAAAGCCTTTGGTCGCACCCTGCGCCAGGCCATCCGCGTGGAAGGCGACAC CCTGCCCTCGTCGAAAGGAGTGCTGTAA
Upstream 100 bases:
>100_bases AGAATAAACAACCCTCTTTAAGCGGCTGCCTGCGAATTACCGTCGGAACCCGTGAAGAAAGCCAGCGCGTCATTGACGCC TTACGTGCGGAGCAAGTTTG
Downstream 100 bases:
>100_bases TGAACGTGGTGATCCTTGATACCGGCTGCGCCAATCTGAACTCGGTGAAGTCAGCCATTGCGCGCCACGGTTATGAACCA AAAGTCAGCCGTGACCCGGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQANFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE QLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Sequences:
>Translated_355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQANFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE QLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >Mature_354_residues SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQANFDGPHNLMMQIFT SQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQ LTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGE ALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKN DHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=99.7183098591549, Blast_Score=737, Evalue=0.0, Organism=Escherichia coli, GI1786399, Length=150, Percent_Identity=32.6666666666667, Blast_Score=79, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=47.8787878787879, Blast_Score=159, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 40278; Mature: 40146
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLG CCCCEEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCC TQSFPQANFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEECCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLG CCCEEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEEEECCCCCC TQSFPQANFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEECCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]