| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yegV [H]
Identifier: 187733353
GI number: 187733353
Start: 1029563
End: 1030513
Strand: Reverse
Name: yegV [H]
Synonym: SbBS512_E1137
Alternate gene names: 187733353
Gene position: 1030513-1029563 (Counterclockwise)
Preceding gene: 187734052
Following gene: 187731795
Centisome position: 22.32
GC content: 56.68
Gene sequence:
>951_bases ATGAGCGGCGCTCGATTACACACGCTGCTGCCTGAATTAACCACGCGTCAGTCGGTGATGGTCGTCGGCGCGGCGGTCAT TGACGTGATCGCCGACGCTTATGTCCTCCCCTGGCGTGGGTGCGATATCGAACTGAAACAGCAGAGCGTTAACGTTGGCG GCTGCGCACTGAATATTGCCGTGGCGTTAAAGCGCCTCGGCATCGAAGCGGGTAATGCCTTGCCGCTCGGTCAGGGGGTA TGGGCGGAGATTATTCGCAACCGGATGGCGAAAGAGGGGTTAATCAGCCTGATCGATAACGCCGAAGGCGATAACGGCTG GTGTCTGGCGCTGGTTGAGCCGGATGGCGAACGTACTTTTATGTCATTCAGCGGTGTGGAAAATCAGTGGAATCGCCAGT GGCTGGCGCGATTAACCGTTGCGCCTGGCAGCCTGCTCTATTTTTCCGGTTATCAACTGGCCTCGCCCTGCGGCGAATTG TTAGTGGAATGGCTGGAAGAGCTGCAAGACGTGACGCCGTTTATCGATTTTGGCCCACGTATTGGCGATATCCCGGACGC ATTACTGGCGCGGATCATGGCCTGTCGACCTTTAGTGTCACTCAATCGTCAAGAGGCTGAGATTGCCGCCGAACGTTTTG CTTTATCCGCAGAGATAACAACACTTGGCAAGCAATGGCAGGAGAAATTTGCCGCGCCGTTGATCGTTCGTCTCGATAAA GAAGGCGCATGGTATTTCAGCAACGACGCTTCTGGCTGCATTCCGGCATTTCCAACGCAAGTTGTCGACACCATTGGGGC GGGCGACAGTCATGCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGG TTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAG
Upstream 100 bases:
>100_bases TCGATCCTCCGTTAAAGGCGGAGCTGGATGCGGTAAATCAGCTTGATTTCAACCGCTATGCCACAGCGCTGGCGAAATAT CGTCAACAACGGGAGGCGGT
Downstream 100 bases:
>100_bases ATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCG GTATTTTGCTATCTAACTGA
Product: PfkB family kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGV WAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV
Sequences:
>Translated_316_residues MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGV WAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV >Mature_315_residues SGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVW AEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELL VEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDKE GAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788417, Length=321, Percent_Identity=97.8193146417446, Blast_Score=607, Evalue=1e-175,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 33998; Mature: 33867
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIELKQQSVNVGGCALNIA CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCHHHHHHH VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE MSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPR EEECCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCC IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLASGLPLADAVLLGNAVASWVVGHRGG CCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC DCAPTREELLLAHKNV CCCCCHHHHHHHHCCC >Mature Secondary Structure SGARLHTLLPELTTRQSVMVVGAAVIDVIADAYVLPWRGCDIELKQQSVNVGGCALNIA CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCHHHHHHH VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTF HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE MSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPR EEECCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCC IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDK CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGLASGLPLADAVLLGNAVASWVVGHRGG CCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCC DCAPTREELLLAHKNV CCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]