| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is dhaM
Identifier: 187733266
GI number: 187733266
Start: 1235150
End: 1236568
Strand: Reverse
Name: dhaM
Synonym: SbBS512_E1357
Alternate gene names: 187733266
Gene position: 1236568-1235150 (Counterclockwise)
Preceding gene: 187731685
Following gene: 187733937
Centisome position: 26.79
GC content: 49.75
Gene sequence:
>1419_bases ATGGTAAACCTGGTCATAGTTTCACATAGCAGCCGACTGGGAGAAGGTGTCGGTGAATTAGCCCGTCAGATGTTAATGAG TGATAGTTGTAAAATCGCCATTGCCGCGGGAATTGACGATCCACAAAATCCTATTGGTACCGATGCCGTCAAAGTGATGG AGGCCATCGAATCTGTTGCTGATGCCGACCATGTGCTGGTCATGATGGATATGGGTAGCGCATTATTGAGTGCTGAAACT GCGCTGGAATTGCTGGCTCCCAAGATCGCCGCAAAAGTACGTTTGTGTGCTGCGCCGTTGGTCGAAGGTACACTGGCAGC AACGGTCAGCGCGGCCTCGGGAGCGGATATCGACAAAGTTATCTTTGACGCTATGCATGCGCTGGAAGCCAAACGTGAAC AACTGGGTTTACCGTCCTCCGACACTGAAATCTCTGACACATGTCCTGCGTACGATGAAGAAGCCCGTTCTCTGGCGGTG GTCATAAAAAACCGTAACGGCCTGCATGTACGTCCGGCCTCCCGGCTGGTTTATACCTTATCGACATTTAATGCCGATAT GTTGCTGGAAAAAAACGGCAAATGCGTCACACCAGAGAGTATTAACCAGATTGCGTTACTACAAGTTCGCTATAACGATA CGCTGCGCCTGATTGCGAAAGGGCCAGAAGCTGAAGAGGCACTGATCGCTTTCCGTCAGCTGGCTGAAGATAACTTTGGT GAAACGGAGGAAGTCGCTCCACCTACTCTGCGTCCCGTTCCGCCTGTTTCGGGTAAAGCCTTTTATTATCAACCAGTTTT ATATACGGTACAGGCAAAATCAACCCTGACCGTGGAAGAAGAACAAGATCGATTACGCCAGGCTATTGACTTCACGTTAT TAGATCTGATGACGTTAACAGCGAAAGCAGAAGCCAGCGGGCTTGACGATATTGCCGCAATCTTTTCTGGTCACCATACA CTGTTAGATAATCCGGAACTGCTGGCGGCGGCAAGCGAACTCCTTCAGCATGAACATTGCACGGCAGAATATGCCTGGCA GCAAGTTCTTAAAGAACTTAGCCAGCAATACCAGCAACTGGATGATGAATATCTACAAGCTCGCTATATTGATGTGGACG ATCTTCTGCATCGCACCCTGGTCCACCTGACCCAAACGAAAGAAGAACTCCCGCAGTTTAACTCGCCAACTATTCTACTG GCGGAGAACATTTATCCTTCCACAGTACTGCAACTGGATCCGGCGGTTGTAAAAGGTATCTGCCTTAGCGCCGGAAGTCC GGTATCCCACAGCGCCCTAATCGCCCGTGAACTGGGGATTGGCTGGATTTGCCAGCAGGGTGAGAAACTGTATGCGATAC AACCAGAAGAAACGCTAACGCTGGACGTTAAAACGCAACGTTTCAACCGTCAGGGTTAA
Upstream 100 bases:
>100_bases CTCGGTGAACGCAGTATTGGTCACCAGGATCCCGGCGCGACCTCGGTGATGTTTATGATGCAAATGTTGGCGTTAGCCGC AAAAGAGTAAGGAATTGGTG
Downstream 100 bases:
>100_bases GCCACTGTTCGGATGGCATCGTTCTGATGTCATCCGGCAATTTACTCAGCACTAATGGTTTTTAACTACCTGTTATATTT TTCACCAATTTATGATGATT
Product: dihydroxyacetone kinase subunit M
Products: NA
Alternate protein names: Phosphocarrier protein HPr; Protein H; Phosphotransferase enzyme IIA component; PTS system EIIA component [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAET ALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHT LLDNPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILL AENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
Sequences:
>Translated_472_residues MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAET ALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHT LLDNPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILL AENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG >Mature_472_residues MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAET ALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHT LLDNPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILL AENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
Specific function: Phosphotransferase subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. DhaM serves as the phosphoryl donor. It is phosphorylated by HPr, then it donates its phosphoryl group to dhaL-ADP, which eventually tran
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI226510935, Length=472, Percent_Identity=99.364406779661, Blast_Score=956, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=168, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789193, Length=178, Percent_Identity=27.5280898876405, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012844 - InterPro: IPR008279 - InterPro: IPR004701 - InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR008731 [H]
Pfam domain/function: PF03610 EIIA-man; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 51507; Mature: 51507
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00369 PTS_HPR_HIS ; PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVA CEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC DADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKV CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHH IFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCEECCHHHEEEEE STFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ECCCCEEEEECCCCEECCCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCC ETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLT CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHH AKAEASGLDDIAAIFSGHHTLLDNPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQL HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHEEECHHHHHHH CLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG HHCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCEEEEEEEHHHCCCCC >Mature Secondary Structure MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVA CEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC DADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKV CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCHHHH IFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCEEEEEEECCCCCEECCHHHEEEEE STFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ECCCCEEEEECCCCEECCCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCC ETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLT CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHH AKAEASGLDDIAAIFSGHHTLLDNPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQL HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH DDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHEEECHHHHHHH CLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG HHCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 2671658; 7984428 [H]