| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yfgJ [H]
Identifier: 187733150
GI number: 187733150
Start: 2685046
End: 2685261
Strand: Reverse
Name: yfgJ [H]
Synonym: SbBS512_E2884
Alternate gene names: 187733150
Gene position: 2685261-2685046 (Counterclockwise)
Preceding gene: 187731692
Following gene: 187733701
Centisome position: 58.17
GC content: 48.15
Gene sequence:
>216_bases ATGGAACTGCATTGTCCACAATGTCAGCATGTGCTTGATCAGGATAACGGCCATGCGCGTTGCCCATCCTGCGGGGAAAT TATTGAAATGAAAGCTCTTTGTCCAGACTGCCATCAACCGTTGCAGGTGTTAAAAGCCTGCGGTGCAGTAGATTACTTCT GTCAGCACGGGCATGGCTTGATATCGAAAAAACGCGTTGAATTCGTGCTGGCTTAA
Upstream 100 bases:
>100_bases GTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGA TGGCTACCGGAGGAATTCAT
Downstream 100 bases:
>100_bases TGCACCTTTTTACGCGATTTTTTTACTGGCTGGATGTTTTTAACTTCACTTTCTATCCAGCCGTCTTCCAGACGTGTGGT TAGCATTTCACCCGCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA
Sequences:
>Translated_71_residues MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA >Mature_71_residues MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082119, Length=71, Percent_Identity=97.1830985915493, Blast_Score=142, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010807 - ProDom: PD060428 [H]
Pfam domain/function: PF07191 DUF1407 [H]
EC number: NA
Molecular weight: Translated: 7901; Mature: 7901
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 14.1 %Cys+Met (Translated Protein) 11.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 14.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGL CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCC ISKKRVEFVLA CCCCCCCEECC >Mature Secondary Structure MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGL CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHCCCCC ISKKRVEFVLA CCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]