| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yeaN
Identifier: 187733069
GI number: 187733069
Start: 1861875
End: 1863071
Strand: Direct
Name: yeaN
Synonym: SbBS512_E2044
Alternate gene names: 187733069
Gene position: 1861875-1863071 (Clockwise)
Preceding gene: 187732262
Following gene: 187731787
Centisome position: 40.34
GC content: 52.88
Gene sequence:
>1197_bases ATGACCTGTTCAACTTCATTAAGCGGCAAAAACAGGATTGTCCTTATCGCTGGCATTCTGATGATTGCCACAACATTACG CGTCACCTTTACCGGCGCAGCACCGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTAT TGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCCGCCCCGGTAGCGCGACGTTTTGGTATGGAACGT AGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGG TACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCG TCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCGGCGGCACTTGGATCGGCTATGGTAATGCCGCTGGCT TTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACA GTGGCGAAGCCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATACTCGGGGTATCTGGCGTTCGCCGCTTGCCT GGCAGGTCACATTGTTTCTTGGGAGCAACTCACTGGTCTATTACGTGATTATTGGCTGGCTTCCGGCGATCCTCATCAGT CACGGCTATAGCGAAGCACAGGCGGGTTCACTGCATGGTTTGCTGCAACTAGCCACAGCAGCTCCCGGTTTGCTGATCCC TCTTTTCTTACATCATGTGAAAGACCAGCGTGGTATTGCAGCGTTCGTTGCCTTGATGTGCGCAGTGGGCGCTGTTGGGC TCTGCTTTATGCCAGCGCACGCGATCACCTGGACTCTGCTTTTCGGTTTTGGTTCCGGCGCAACAATGATACTGGGGTTG ACGTTCATTGGTCTTCGGGCAAGTTCTGCGCATCAGGCGGCGGCACTCTCGGGGATGGCACAATCCGTCGGGTATTTGCT GGCAGCCTGTGGGCCGCCGCTAATGGGTAAAATACACGATGCTAACGGTAACTGGTCCGTACCACTGATGGGTGTTGCAA TACTTTCACTACTGATGGCGATTTTCGGACTTTGCGCCGGGAGAGACAAAGAAATTCGCTCATATCCGGTGCTATAG
Upstream 100 bases:
>100_bases TCATTTTGTCCGAATTTAGCGATAATTTGTCATTTTAGCTTGATTCAACATAACAATAAAAACGGTAAGGTACAGCCTCG TTTGTAACAATGAGAAGCAT
Downstream 100 bases:
>100_bases TGACGTGACAAATCATGCGTGAAAGGGAGAACAAACACGATGAATATTCAGTGCAAACGCGTTTATGATCCGGCTGAACA GAGCGATGGTTATCGCGTAC
Product: inner membrane transport protein yeaN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMER SLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLA LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGSNSLVYYVIIGWLPAILIS HGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIRSYPVL
Sequences:
>Translated_398_residues MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMER SLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLA LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGSNSLVYYVIIGWLPAILIS HGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGL TFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIRSYPVL >Mature_397_residues TCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERS LFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLAL NGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGSNSLVYYVIIGWLPAILISH GYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLT FIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIRSYPVL
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=393, Percent_Identity=99.4910941475827, Blast_Score=762, Evalue=0.0, Organism=Escherichia coli, GI1786536, Length=348, Percent_Identity=26.7241379310345, Blast_Score=95, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41775; Mature: 41643
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL CCCCCCCCCCCCEEHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHH LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLALNGFGWQGALLMLMCFPLLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGSNSLVYYVIIGWLPAILIS HHHHCHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC ANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIRSYPVL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL CCCCCCCCCCCEEHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCHHHHHHH LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVMPLALNGFGWQGALLMLMCFPLLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGSNSLVYYVIIGWLPAILIS HHHHCHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHH HGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC ANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIRSYPVL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]