| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732977
Identifier: 187732977
GI number: 187732977
Start: 22950
End: 23294
Strand: Direct
Name: 187732977
Synonym: SbBS512_E0024
Alternate gene names: NA
Gene position: 22950-23294 (Clockwise)
Preceding gene: 187733923
Following gene: 187731181
Centisome position: 0.5
GC content: 52.75
Gene sequence:
>345_bases ATGACATTTTTACAACATTGTCAGTGCGTTAAGGCGGGATGTTTTTGGCTGACGCCAGTCCAGCTTATCGAGGAGCATTG CCAGTTGCTAGCGGGTAATGGATACCTTGCCGTCACGCACAGCAGGCCAGATAAACTGGCCTTCCTCCAGGCGTCTGGTG AACAGGCACAGACCATCAGCATCAGCCCACAGGATTTTAATCATGTCACCCCGTCGGCCACGGAAGATGAACAGGTGACC GGAGAAGGGATTATCATTCAGCACATGCTGTACCTGTTCACCCAGCCCGTTGAAAGACTTACGCATATCGGTTATCCCAG CAACGAGCCAGATGCGGGTGCCTGA
Upstream 100 bases:
>100_bases CAACCAGACTCAGTTGCTGGTCTTTCTGACGGAGCTGGCATTCCAGTTCTGCAATGCGAATGAGGTATTTTTGATTCATG GCCGTTTTTATAATCCGGCC
Downstream 100 bases:
>100_bases CGGGAGTGAGATCATCGTCCCCTCCCGGTCAGTTCACGGATCAACACTGTGAGCAGCTCTGGTGAAGGATTTTCCAGCGT CATGTTACCGTGACGGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTFLQHCQCVKAGCFWLTPVQLIEEHCQLLAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVT GEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
Sequences:
>Translated_114_residues MTFLQHCQCVKAGCFWLTPVQLIEEHCQLLAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVT GEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA >Mature_113_residues TFLQHCQCVKAGCFWLTPVQLIEEHCQLLAGNGYLAVTHSRPDKLAFLQASGEQAQTISISPQDFNHVTPSATEDEQVTG EGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12581; Mature: 12450
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLQHCQCVKAGCFWLTPVQLIEEHCQLLAGNGYLAVTHSRPDKLAFLQASGEQAQTIS CCHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEEE ISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TFLQHCQCVKAGCFWLTPVQLIEEHCQLLAGNGYLAVTHSRPDKLAFLQASGEQAQTIS CHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEEE ISPQDFNHVTPSATEDEQVTGEGIIIQHMLYLFTQPVERLTHIGYPSNEPDAGA ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA