| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732802
Identifier: 187732802
GI number: 187732802
Start: 1785092
End: 1785232
Strand: Direct
Name: 187732802
Synonym: SbBS512_E1952
Alternate gene names: NA
Gene position: 1785092-1785232 (Clockwise)
Preceding gene: 187731328
Following gene: 187732992
Centisome position: 38.67
GC content: 52.48
Gene sequence:
>141_bases ATGTCGCAAAAATCGCTTACGGCCATCACGTTCTGCGTGACGGCAATCCTCATCATCTGGATGCTGCACGGTTCGCTGTG CGAAATACGGATGAGCTTCTGGGGAGCGGAGTTTGCGGCGTTCTTACAGTGTAAGCAGTAA
Upstream 100 bases:
>100_bases GTGGAAAGGCCCCGGAAAACATTTTTGTTTAACCGAGGCCCTAACCGTCTACCCTAAGCAAGTGATAGGTTAGCGCCTCC CCGAAAAAGGAGCAAGCGCT
Downstream 100 bases:
>100_bases GGAAACCGCGACGGGGGAGCAATCCCCCGTCAATCGGTTGCCAGGGTAAGGTCGATAAGGCACCCTATCTCACAGACATG AACAACAAACCCGCAGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ
Sequences:
>Translated_46_residues MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ >Mature_45_residues SQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5226; Mature: 5095
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 13.0 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA