| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ybjH [H]
Identifier: 187732611
GI number: 187732611
Start: 2300234
End: 2300512
Strand: Direct
Name: ybjH [H]
Synonym: SbBS512_E2502
Alternate gene names: 187732611
Gene position: 2300234-2300512 (Clockwise)
Preceding gene: 187733065
Following gene: 187731118
Centisome position: 49.83
GC content: 53.76
Gene sequence:
>279_bases ATGAAAAATTGTCTACTGTTGGGCGCGCTTTTAATGGGCTTTACTGGTGTGGCGATGGCGCAAAGTGTCACCGTCGATGT GCCGAGTGGATACAAAGTGGTTGTAGTTCCTGATTCAGTCAGCGTTCCACAAGCGGTCAGCGTCGCGACTGTGCCGCAAA CCGTCTATGTGGCTCCTGCGCCAGCTCCGGCTTACCGCCCGCATCCTTATGCTCGCCATCTTGCCAGCGTAGGTGAAGGG ATGGTTATCGAACACCAGATTGACGACCATCACCATTAA
Upstream 100 bases:
>100_bases GACCAATAAAAACGGCAGCACGCCCGGCAACACAATACCTGAATGAAGGCTGCATAATTCGCAGAAATTAACCCGCTGCA TTATTTCAGGCGAAATGATT
Downstream 100 bases:
>100_bases TTCGAGAATGCCTGATCGCACAAAGCAGTCAGGCATTTTTTTACCCTTCGTGAGAATTTCCCATCTGTTTATCTTTTAAA AAGATAACCATCAGCGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEG MVIEHQIDDHHH
Sequences:
>Translated_92_residues MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEG MVIEHQIDDHHH >Mature_92_residues MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEG MVIEHQIDDHHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787066, Length=92, Percent_Identity=98.9130434782609, Blast_Score=182, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9698; Mature: 9698
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPA CCCHHHHHHHHHHHHCHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCEEEEECC PAPAYRPHPYARHLASVGEGMVIEHQIDDHHH CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPA CCCHHHHHHHHHHHHCHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCEEEEECC PAPAYRPHPYARHLASVGEGMVIEHQIDDHHH CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]