Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is lplT

Identifier: 187732571

GI number: 187732571

Start: 2824576

End: 2825769

Strand: Direct

Name: lplT

Synonym: SbBS512_E3027

Alternate gene names: 187732571

Gene position: 2824576-2825769 (Clockwise)

Preceding gene: 187730172

Following gene: 187733924

Centisome position: 61.19

GC content: 55.7

Gene sequence:

>1194_bases
ATGAGTGAGTCAGTGCACACTAACACTTCGTTGTGGTCGAAGGGGATGAAAGCGGTTATCGTGGCGCAGTTTCTCTCTGC
GTTTGGCGATAATGCCCTACTGTTTGCCACTCTGGCGTTACTGAAAGCGCAGTTCTATCCGGAGTGGAGCCAGCCCATCC
TGCAAATGGTGTTTGTAGGTGCTTACATTCTTTTTGCGCCGTTTGTCGGGCAGGTGGCGGATAGCTTCGCCAAAGGCCGG
GTGATGATGTTTGCCAACGGCCTGAAGCTGCTGGGCGCAGCCAGTATCTGCTTTGGTATCAATCCGTTTCTCGGCTATAC
GCTGGTGGGGGTTGGTGCTGCAGCCTATTCACCGGCGAAATACGGTATTCTCGGCGAATTAACCACGGGTAGTAAGTTAG
TGAAAGCTAACGGTTTAATGGAAGCTTCTACCATAGCGGCGATTTTGCTCGGTTCCGTAGCCGGTGGTGTGCTGGCTGAC
TGGCATGTCCTCGTCGCCCTGGCCGCATGCGCACTGGCCTACGGTGGTGCGGTCGTTGCCAATATCTACATTCCCAAACT
GGCGGCGGCGCGTCCGGGGCAGTCCTGGAATCTCATCAACATGACCCGCAGTTTCCTGAATGCCTGCACCTCGCTATGGC
GCAATGGTGAAACGCGTTTTTCGCTGGTGGGCACCAGTTTATTCTGGGGAGCGGGTGTCACGCTGCGTTTCCTGTTGGTG
CTGTGGGTACCGGTGGCGCTGGGCATTACCGATAACGCTACGCCCACCTATCTCAACGCGATGGTAGCGATTGGTATCGT
GGTTGGCGCAGGTGCGGCAGCGAAGTTAGTTACGCTGGAAACCGTGTCACGCTGTATGCCAGCCGGGATTTTGATTGGCG
TGGTGGTACTGATTTTTTCCCTGCAACACGAGCTGCTGCCAGCCTATGCCTTGTTGATGCTGATTGGCGTGATGGGGGGC
TTTTTTGTCGTTCCGCTCAATGCGTTGCTACAGGAGCGGGGTAAAAAAAGCGTCGGGGCGGGGAATGCGATTGCAGTACA
AAACCTTGGCGAAAACAGCGCCATGTTGTTGATGCTGGGCATTTACTCGCTGGCGGTAATGGTAGGCATCCCGGTCGTGC
CCATTGGCATTGGCTTCGGTGCGCTGTTTGCGCTGGCAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAA

Upstream 100 bases:

>100_bases
CCGCGCGATATTCGCTATCTGAAACAGATGCCATTACTTGGCAGCGGCAAACCTGACTTTGTCACGTTGAAAAGCTGGAT
AGACGAAGCGGAACAACACG

Downstream 100 bases:

>100_bases
TATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACCGCTTCAATTTCAGCT
AATACGTCTTCGCTTAACTC

Product: lysophospholipid transporter LplT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGR
VMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV
LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGG
FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH

Sequences:

>Translated_397_residues
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGR
VMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV
LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGG
FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH
>Mature_396_residues
SESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRV
MMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADW
HVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVL
WVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGF
FVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH

Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family

Homologues:

Organism=Escherichia coli, GI1789200, Length=397, Percent_Identity=99.7481108312343, Blast_Score=780, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPLT_ECO24 (A7ZQU1)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001464170.1
- ProteinModelPortal:   A7ZQU1
- STRING:   A7ZQU1
- EnsemblBacteria:   EBESCT00000020163
- GeneID:   5589518
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_3155
- eggNOG:   COG0477
- GeneTree:   EBGT00050000011586
- HOGENOM:   HBG364376
- ProtClustDB:   PRK11195
- BioCyc:   ECOL331111:ECE24377A_3155-MONOMER
- HAMAP:   MF_01585
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 41642; Mature: 41511

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f554878)-; HASH(0x20293988)-; HASH(0x1f4d33d8)-; HASH(0x1faa954c)-; HASH(0x1fb3e0fc)-; HASH(0x1f8f90bc)-; HASH(0x202799e0)-; HASH(0x20339004)-; HASH(0x2017b0ec)-; HASH(0x1f8e51b4)-; HASH(0x1f66b4c8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCC
YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA
CCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEE
NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHH
LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH
IYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK
HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCC
YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA
CCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEE
NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHH
LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH
IYSLAVMVGIPVVPIGIGFGALFALAITALWIWQRRH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA