| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yeaK [H]
Identifier: 187732567
GI number: 187732567
Start: 1859777
End: 1860280
Strand: Direct
Name: yeaK [H]
Synonym: SbBS512_E2041
Alternate gene names: 187732567
Gene position: 1859777-1860280 (Clockwise)
Preceding gene: 187733365
Following gene: 187732262
Centisome position: 40.29
GC content: 50.0
Gene sequence:
>504_bases ATGACTGAAATGGCTAAAGGAAGCGTGACGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTAACTTCCGCGT CGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTTTAGGCCAGGGAGCTAAGGCAC TGGTATGTAAAGTCAAAGGCAATGGCGTAAATCAACATGTTCTGGCGATCCTCGCTGCCGATCAACAGGCCGATCTGAGC CAACTTGCCAGCCATATAGGCGGATTACGCGCTTCGTTAGCCAGCCCTGCTGAAGTCGATGAACTCACAGGCTGTGTCTT CGGCGCGATCCCCCCTTTCAGCTTCCATCCAAAACTCAAACTGGTTGCCGACCCTCTACTCTTCGAACGATTTGATGAAA TCGCCTTCAATGCAGGGATGCTGGATAAATCCGTTATTTTGAAAACCACGGATTATTTGCGCATTGCGCAACCAGAACTG GTCAATTTCCGCCGCACTGCGTAA
Upstream 100 bases:
>100_bases TAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCT TGTAATCTCAGGAGCGTGAA
Downstream 100 bases:
>100_bases CTAGCCTGTCCGTTCAATAAGCAGAACGGACAAAACCAGCACAACAGCAATGGCAAAAAACGATGACGTGATAATCAGTG TCTCGACGAACATTTGATCG
Product: YbaK/prolyl-tRNA synthetase-associated domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLS QLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL VNFRRTA
Sequences:
>Translated_167_residues MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLS QLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL VNFRRTA >Mature_166_residues TEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQ LASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPELV NFRRTA
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788087, Length=167, Percent_Identity=98.8023952095808, Blast_Score=337, Evalue=3e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007214 [H]
Pfam domain/function: PF04073 YbaK [H]
EC number: NA
Molecular weight: Translated: 17880; Mature: 17749
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG CCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHH LVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPELVNFRRTA HHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCHHHCCCCCCC >Mature Secondary Structure TEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG CCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHH LVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPELVNFRRTA HHHCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]