| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yqaB [H]
Identifier: 187732561
GI number: 187732561
Start: 2975360
End: 2975923
Strand: Direct
Name: yqaB [H]
Synonym: SbBS512_E3186
Alternate gene names: 187732561
Gene position: 2975360-2975923 (Clockwise)
Preceding gene: 187733187
Following gene: 187733168
Centisome position: 64.46
GC content: 53.55
Gene sequence:
>564_bases ATGTACGAGCGTTATGCAGGTTTAATTTTTGATATGGATGGCACAATCCTGGATACGGAGCCTACGCACCGTAAAGCGTG GCGCGAAGTATTAGGGCACTACGGTCTTCAGTACGATGTTCAGGCAATGATTGCGCTTAATGGATCGCCCACCTGGCGTA TTGCTCAGGCAATTATTGAGCTGAATCAGGCCGATCTCGACCCGCATGCGTTAGCGCGTGAAAAAACAGAAGCAGTAAGA AGTATGCTGCTGGATAGTGTCGAGCCGCTTCCTCTTGTTGAAGTGGTGAAAAGTTGGCATGGTCGTCGCCCAATGGCTGT AGGAACGGGGAGTGAAAGCGCCATCGCTGAGGCATTGCTGGCGCACCTGGGATTACGCCGTTATTTTGACGCCGTCGTCG CTGCTGATCACGTCAAACACCATAAACCCGCGCCAGACACATTTTTGTGCGCGCAGCGTATGGGCGTGCAACCGACGCAG TGTGTGGTCTTTGAAGATGCCGATTTCGGTATTCAGGCGGCCCGTGCAGCAGGCATGGACGCCGTGGATGTTCGCTTGCT GTGA
Upstream 100 bases:
>100_bases ACTTTATCCATTTCCTGAATTTTCTTCTCCTTCGCCATCAGCGACAAAATCAAGCAATTACGCTAAAGTAGCGTCATATT TTTCGACTTGCGAGAAGACC
Downstream 100 bases:
>100_bases GTGAAGCGTTATCGCTTTTCTCGTTGTTTGCCCGTAGTTTTCTCAGCGCTACACTATTACCCGGCAACTCCGAAGTCGTG CTGGTGGCAATGTTGCTTTC
Product: fructose-1-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQ CVVFEDADFGIQAARAAGMDAVDVRLL
Sequences:
>Translated_187_residues MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQ CVVFEDADFGIQAARAAGMDAVDVRLL >Mature_187_residues MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVR SMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQ CVVFEDADFGIQAARAAGMDAVDVRLL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates fructose 1-phosphate and 6-phosphogluconate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=190, Percent_Identity=35.2631578947368, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI207113149, Length=213, Percent_Identity=31.4553990610329, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=97.8723404255319, Blast_Score=375, Evalue=1e-106, Organism=Escherichia coli, GI1787576, Length=191, Percent_Identity=29.8429319371728, Blast_Score=83, Evalue=9e-18, Organism=Escherichia coli, GI1788021, Length=184, Percent_Identity=30.9782608695652, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137324, Length=185, Percent_Identity=32.4324324324324, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 20686; Mature: 20686
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH AHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQCVVFEDADFGIQAARAAGMD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCC AVDVRLL CEEEEEC >Mature Secondary Structure MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE CCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHH AHLGLRRYFDAVVAADHVKHHKPAPDTFLCAQRMGVQPTQCVVFEDADFGIQAARAAGMD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCC AVDVRLL CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]