| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is iutA
Identifier: 187732552
GI number: 187732552
Start: 4324100
End: 4326298
Strand: Reverse
Name: iutA
Synonym: SbBS512_E4630
Alternate gene names: 187732552
Gene position: 4326298-4324100 (Counterclockwise)
Preceding gene: 187733647
Following gene: 187730090
Centisome position: 93.72
GC content: 52.61
Gene sequence:
>2199_bases ATGATGCGCAAAAAGTATATGCCCCGGGCTCTTGGTCCGCTGCTTCTTGTCGTGCTGTCACCAGCTGTCGCCCAGCAAAA CGATGATAATGAGATCATAGTGTCTGCCAGCCGCAGCAATCGAACTGTAGCGGAGATGGCGCAAACCACCTGGGTTATCG AAAATGCCGAACTGGAGCAGCAGATTCAGGGCGGTAAAGAGCTGAAAGACGCACTGGCTCAGTTAATCCCCGGCCTTGAT GTCAGCAGCCAGAGTCGAACCAACTACGGTATGAACATGCGTGGCCGCCCGCTGGTTGTCCTGATTGACGGTGTGCGCCT CAACTCTTCACGTTCCGACAGCCGACAACTGGACTCTGTCGATCCTTTTAATATCGACCATATTGAAGTGATCTCCGGCG CGACGGCCCTGTACGGTGGCGGGAGTACCGGAGGGTTGATCAACATCGTGACCAAAAAAGGTCAGCCGGAAACCATGATG GAGTTTGAGGCTGGCACAAAAAGTGGCTTTAACAGCAGTAAAGATCACGATGAGCGCATTGCCGGTGCTGTCTCCGGCGG AAATGACCATATCTCCGGACGTCTTTCCGTGGCATATCAGAAATTTGGCGGCTGGTTTGACGGTAACGGCGATGCCACCC TGCTTGATAACACCCAGACCGGCCTGCAGCACTCCAATCGGCTGGACATCATGGGAACCGGTACGCTGAACATCGATGAA TCCCGGCAGCTTCAACTGATAACGCAGTACTATAAAAGTCAGGGAGACGACAATTACGGGCTTAATCTCGGGAAAGGCTT TTCCGCCATCAGCGGGAGCAGCACACCATACGTCAGTAAGGGGCTGAATTCTGACCGCATTCCCGGCACTGAGCGGCATT TGATCAGCCTGCAGTACTCTGACAGTGATTTCCTGGGACAGGAACTGGTCGGTCAGGTTTACTACCGCGATGAGTCGTTG CGGTACTACCCGTTCCCGACGGTAAATGCGAATAAACAGGCGACGGCTTTCTCCTCGTCACAGCAGGATACCGACCAGTA CGGCATGAAACTGACTCTGAACAGCCAACTGATGGACGGCTGGCAAATCACCTGGGGGCTGGATGCTGAGCATGAGCGCT TTACCTCCAACCAGATGTTCTTCGATCTGGCTCAGGCAAGTGCTTCCGGAGGGCTGAACAACCATAAGATTTACACCACC GGGCGCTATCCGTCATATGACATCACCAATCTGGCGGCCTTCCTGCAATCCAGCTATGACATTAATGATATTTTTACCGT TAGCGGTGGCGTACGCTATCAGTATACTGAGAACAGGGTAGATGATTTCATCGACTACACGCAGCAACAGAAGATTGCTG CCGGGAAGGCGATATCTGCCGACGCCATTCCTGGTGGTTCGGTAGATTACGATAACTTTCTGTTCAATGCTGGTCTGCTG ATGCACATCACCGAACGTCAGCAGGCATGGTTCAATTTTTCCCAGGGGGTGGCATTGCCGGATCCGGGGAAATATTATGG TCGCGGCATCTATGGTGCAGCAGTGAACGGCCATCTTTCCCTGACAAAGAGCGTGAACGTCAGCGACAGTAAGCTGGAAG GCGTGAAAGTCGATTCTTATGAACTGGGCTGGCGCTTTACCGGTGACAACCTGCGGACTCAAATCGCGGCATATTACTCG CTTTCCAATAAGAGCGTGGAAAGGAATAAAGATCTGACCATCAGTGTGAAGGACGACAGGCGCCGTATTTACGGCGTGGA AGGTGCAGTGGACTACCTGATCCCGGATACTGACTGGAGTACCGGTGTGAACTTCAATGTGCTGAAAACCGAGTCGAAAG TGAACGGTCAATGGCAAAAATATGACGTGAAGGAATCAAGTCCATCGAAAGCGACAGCTTACATTAACTGGGCGCCGGAA CCGTGGAGTCTGCGTGTACAGAGCACCACTTCTTTCGACGTAAGCGATGCAGAGGGTAACGATATTAATGGTTACACTAC CGTCGATTTTATCAGTAGTTGGCAGCTTCCGGTGGGAACACTCAGCTTCAGCGTTGAGAACCTCTTCGACCGTGACTATA CCACTGTCTGGGGACAGCGTGCACCTCTGTACTACAGCCCGGGTTACGGCCCTGCTTCACTGTACGACTACAAAGGCCGG GGCCGAACCTTTGGTCTGAACTACTCAGTGCTGTTCTGA
Upstream 100 bases:
>100_bases TGCCGCCCGCACTGATTCAGTGGCGCAGCGGCAGCCGGAAAAAACCGCAGCCGGAGGCTGCTTCTTTAACTCACTATACA GCAAATATTCAGGAATAACG
Downstream 100 bases:
>100_bases CGGGGATGCTTTTGCAACAAGGGTATGCTGTAAACAACATGGTCCTTGGTGGCCATGTTGTTTACAGCCAGTATAATATA CAGCCTTAACAAGATATTCC
Product: ferric aerobactin receptor IutA
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MMRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLD VSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMM EFEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDE SRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESL RYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTT GRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIAAGKAISADAIPGGSVDYDNFLFNAGLL MHITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYS LSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPE PWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR GRTFGLNYSVLF
Sequences:
>Translated_732_residues MMRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLD VSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMM EFEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDE SRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESL RYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTT GRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIAAGKAISADAIPGGSVDYDNFLFNAGLL MHITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYS LSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPE PWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR GRTFGLNYSVLF >Mature_732_residues MMRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQQIQGGKELKDALAQLIPGLD VSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMM EFEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDE SRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESL RYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTT GRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQKIAAGKAISADAIPGGSVDYDNFLFNAGLL MHITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYS LSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPE PWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR GRTFGLNYSVLF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=151, Percent_Identity=29.1390728476821, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81037; Mature: 81037
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQ CCCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEECCHHHH QIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSV HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCCC DPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFNSSKDHDERI CCCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHH AGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDE EEEECCCCCCCCCEEEEEEHHHCCEECCCCCEEEECCCHHCCCCCCEEEEEECCEECCCC SRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEC DSDFLGQELVGQVYYRDESLRYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDG CCHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEECCCCCCCHHHCCEEEEECCCCCCC WQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTGRYPSYDITNLAAFLQSSYD EEEEECCCCCHHHHCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCC INDIFTVSGGVRYQYTENRVDDFIDYTQQQKIAAGKAISADAIPGGSVDYDNFLFNAGLL CCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHEECCCEE MHITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLSLTKSVNVSDSKLEGVKVDSY EEEECHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCEEEEEEECCCCCCCCCCEEECCE ELGWRFTGDNLRTQIAAYYSLSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWS EECEEEECCCHHEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCC TGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGN CCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCC DINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR CCCCEEEEEEEECCCCCCEEEEEEHHHHHCCCCHHHCCCCCCEEECCCCCCCCEEEECCC GRTFGLNYSVLF CEEEEEEEEEEC >Mature Secondary Structure MMRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAEMAQTTWVIENAELEQ CCCCCCCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCCCHHHHHHHHEEEEECCHHHH QIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLIDGVRLNSSRSDSRQLDSV HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEECCCCCCCCCCCCC DPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMMEFEAGTKSGFNSSKDHDERI CCCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHH AGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQTGLQHSNRLDIMGTGTLNIDE EEEECCCCCCCCCEEEEEEHHHCCEECCCCCEEEECCCHHCCCCCCEEEEEECCEECCCC SRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPYVSKGLNSDRIPGTERHLISLQYS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEC DSDFLGQELVGQVYYRDESLRYYPFPTVNANKQATAFSSSQQDTDQYGMKLTLNSQLMDG CCHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEECCCCCCCHHHCCEEEEECCCCCCC WQITWGLDAEHERFTSNQMFFDLAQASASGGLNNHKIYTTGRYPSYDITNLAAFLQSSYD EEEEECCCCCHHHHCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCC INDIFTVSGGVRYQYTENRVDDFIDYTQQQKIAAGKAISADAIPGGSVDYDNFLFNAGLL CCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHEECCCEE MHITERQQAWFNFSQGVALPDPGKYYGRGIYGAAVNGHLSLTKSVNVSDSKLEGVKVDSY EEEECHHHHHCCCCCCCCCCCCCHHHCCEEEEEEECCEEEEEEECCCCCCCCCCEEECCE ELGWRFTGDNLRTQIAAYYSLSNKSVERNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWS EECEEEECCCHHEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCEEEEEECCCCCC TGVNFNVLKTESKVNGQWQKYDVKESSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGN CCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCEECCCCCCC DINGYTTVDFISSWQLPVGTLSFSVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGR CCCCEEEEEEEECCCCCCEEEEEEHHHHHCCCCHHHCCCCCCEEECCCCCCCCEEEECCC GRTFGLNYSVLF CEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA