| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732522
Identifier: 187732522
GI number: 187732522
Start: 1760856
End: 1761194
Strand: Direct
Name: 187732522
Synonym: SbBS512_E1918
Alternate gene names: NA
Gene position: 1760856-1761194 (Clockwise)
Preceding gene: 187732987
Following gene: 187730022
Centisome position: 38.15
GC content: 48.97
Gene sequence:
>339_bases ATGCTGAAGCAACGCCGTAATTTTCGTACCGGAACAGAACGCCACGCTAACCGTTTCACTACCAGTGCATCACGCAGCAA CATCCGCTACAGCCTGAGTGATACACACGCAACGCAGGATGGCTACCCAGTAAAACAAATCGGCGAGCACACCTGGCTGA TTGAGAAAGCTGGAATCGTGATCCACAAATGCCCACGCAATCCGTTTACCGGAAACCGCATTTTTGCATTGAGCTGTGGC GACAATCAGTGCGGGCAGGATTTCACATTATACGAAGCACTTCGCACGATTGATCGTCTGCTTCGCGGGCAAAGTTTTAT TAAACAGACTGATTTATAA
Upstream 100 bases:
>100_bases AGAACTCAAGACGCACAGTAAATCTCTTCGCTCTTTTCCTGAAAACAATCAGGAGCGCAGAAAAATACGTGCAGATGACA AAATAACGAGGTGTCATTTT
Downstream 100 bases:
>100_bases CAGGTGCTTTATGACCAAAGACCATGCACAAGGTGTATTTATCCGTTTTATTGATTTTCGCGGTGAACTGTTATTACGTG CATCCGCTATTGACGGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIVIHKCPRNPFTGNRIFALSCG DNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL
Sequences:
>Translated_112_residues MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIVIHKCPRNPFTGNRIFALSCG DNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL >Mature_112_residues MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIVIHKCPRNPFTGNRIFALSCG DNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12888; Mature: 12888
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIV CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEECCCEE IHKCPRNPFTGNRIFALSCGDNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL EEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKQRRNFRTGTERHANRFTTSASRSNIRYSLSDTHATQDGYPVKQIGEHTWLIEKAGIV CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHCCEEEEEECCCEE IHKCPRNPFTGNRIFALSCGDNQCGQDFTLYEALRTIDRLLRGQSFIKQTDL EEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA