Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is ycgJ [H]

Identifier: 187732505

GI number: 187732505

Start: 1213928

End: 1214296

Strand: Direct

Name: ycgJ [H]

Synonym: SbBS512_E1331

Alternate gene names: 187732505

Gene position: 1213928-1214296 (Clockwise)

Preceding gene: 187734212

Following gene: 187730559

Centisome position: 26.3

GC content: 42.28

Gene sequence:

>369_bases
ATGAATATGATGCGTATTTTTTATATCGGATTGTCAGGTGTGGGGATGATGTTCTCATCAATGGCGTCTGGACATGACGC
TGGCGGACTTCAATCTCCGGCGTGCGGCGTTGTTTGCGACCCGTATATTTGTGTGAACTCAGATGGCATTTCCCCAGAGT
TAACAAGGAAATATCTCGGCGAAAAAGCCGCTGAAAACTTACAATCATTACAAGGCTACGATCCCAGCGAATTTACATTC
GCTAACGGTGTATTTTGCGATGTTAAAGAAAAATTATGTCGTGATGATCGTTATTTTGGTGTGGATGGTAAGCGGAGTGG
AAAAATCAATCAAATCACCACAAAGATGTTATTTATGTGTCGTGAGTGA

Upstream 100 bases:

>100_bases
TCTGTCAGGTCATCGTAACTCGTCCAGGTCAGCGGTTTTGATTACGGATTGATGATGAAATGAGCATAAGTGTTGTACGG
TTGGATTATCAGGATGTGCT

Downstream 100 bases:

>100_bases
TGCCTTGTTTACATTATGTTCTATTCGGCGGTAATGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGC
TTGCGTGGCTTCCATTTCCA

Product: putative fels-1 Prophage Protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTF
ANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMCRE

Sequences:

>Translated_122_residues
MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTF
ANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMCRE
>Mature_122_residues
MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTF
ANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMCRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787425, Length=122, Percent_Identity=98.3606557377049, Blast_Score=250, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008617 [H]

Pfam domain/function: PF05666 Fels1 [H]

EC number: NA

Molecular weight: Translated: 13450; Mature: 13450

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLG
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHH
EKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMC
HHHHHHHHHHCCCCCCCEEECCCEEEHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHC
RE
CC
>Mature Secondary Structure
MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLG
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEECCCCCCHHHHHHHHH
EKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMC
HHHHHHHHHHCCCCCCCEEECCCEEEHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHC
RE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]