| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is artQ
Identifier: 187732498
GI number: 187732498
Start: 2272269
End: 2272985
Strand: Direct
Name: artQ
Synonym: SbBS512_E2469
Alternate gene names: 187732498
Gene position: 2272269-2272985 (Clockwise)
Preceding gene: 187732757
Following gene: 187734247
Centisome position: 49.23
GC content: 54.81
Gene sequence:
>717_bases ATGAATGAATTTTTTCCTTTAGCAAGCGCCGCCGGGATGACCGTCGGCCTTGCCGTTTGTGCATTGATTGTCGGGCTGGC GCTGGCGATGTTCTTTGCGGTATGGGAGTCGGAAAAATGGCGTCCTGTCGCGTGGGCAGGTTCAGCGCTGGTAACCATTC TGCGTGGCCTGCCAGAAATTCTGGTGGTGCTGTTTATCTATTTTGGCTCCTCGCAGCTGCTGCTGACGCTTTCGGATGGC TTCACTATCAATCTTGGGTTCGTGCAGATCCCAGTGCAGATGGACATTGAGAACTTCGACGTTAGCCCGTTCCTTTGTGG TGTCATCGCTCTGTCACTGCTGTATGCCGCCTATGCCTCGCAAACGCTTCGGGGCGCGTTGAAAGCGGTGCCGGTGGGTC AGTGGGAGTCTGGTCAGGCGCTGGGGCTGTCGAAATCGGCTATCTTTTTCCGTCTGGTGATGCCGCAGATGTGGCGTCAT GCGCTGCCTGGCCTCGGTAACCAGTGGCTGGTGCTGCTGAAAGATACCGCGCTGGTCAGTTTGATTAGTGTGAATGATTT AATGCTGCAAACAAAAAGCATCGCTACTCGTACCCAGGAACCATTTACCTGGTACATTGTGGCGGCGGCGATTTACCTGG TGATCACCCTGCTCAGTCAGTACATTCTCAAACGCATTGACCTGCGCGCGACACGTTTTGAGCGGAGGCCCAGCTAA
Upstream 100 bases:
>100_bases CACTGAGCTGCAGCAGAAACTCAACACTGCGCTGGAAAAAGTGAAGAAAGATGGCACTTACGAAACCATCTACAACAAAT GGTTCCAGAAGTAATTCCTG
Downstream 100 bases:
>100_bases TGTTTGAGTATTTACCCGAACTGATGAAAGGGCTACACACCAGCCTGACGCTAACCGTTGCCTCGCTGATTGTGGCACTG ATTCTGGCATTGATTTTTAC
Product: arginine transporter permease subunit ArtQ
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDG FTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS
Sequences:
>Translated_238_residues MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDG FTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS >Mature_238_residues MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDG FTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787087, Length=238, Percent_Identity=99.5798319327731, Blast_Score=474, Evalue=1e-135, Organism=Escherichia coli, GI1788646, Length=224, Percent_Identity=32.1428571428571, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI1788226, Length=232, Percent_Identity=30.6034482758621, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787086, Length=237, Percent_Identity=29.535864978903, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787030, Length=229, Percent_Identity=27.5109170305677, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=26.6968325791855, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786873, Length=217, Percent_Identity=27.1889400921659, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI87082239, Length=184, Percent_Identity=29.8913043478261, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786874, Length=222, Percent_Identity=23.8738738738739, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI48994930, Length=128, Percent_Identity=26.5625, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26276; Mature: 26276
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH LVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYAS HHHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHH LVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYAS HHHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]