Click here to switch to the map view.

The map label for this gene is yjjP [H]

Identifier: 187732424

GI number: 187732424

Start: 4575741

End: 4576574

Strand: Reverse

Name: yjjP [H]

Synonym: SbBS512_E4904

Alternate gene names: 187732424

Gene position: 4576574-4575741 (Counterclockwise)

Preceding gene: 187731991

Following gene: 229259637

Centisome position: 99.15

GC content: 51.56

Gene sequence:

>834_bases
ATGATACAAATGGATTCTCATTATCTGAACAATACGCAGCACGTCTATGACAAAGGGCGAGTTATGCAAACTGAGCAACA
GCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGC
TTTCCTCACGACTGGGTCGGGCGTTGGGGATGGACAGCGTCGAAAGTTCTATCTCTTCGAACGCCATAGTGCTGACAACC
ATTAAAGATGGGCAATGCCTGACATCGACACGTAAAAATCACGATCGCGGCATTAATATGCATGTGGTGACTGAAGTCCA
GCACATTGTGATTCTGGCGGAGCACCATCTGCTGGATTACAAAGGCGTAGAGAAACGATTTAGCCAAATTCAGCCATTAC
GTTACCCAAGATGGCTGGTAGCCTTAATGGTTGGCCTTTCTTGCGCCTGTTTCTGCAAACTCAATAAAGGTGGCTGGGAT
GGTGCCGTCATCACCTTCTTTGCCAGTACGGCCGCGATGTATATCCGCCAGCTGCTGGCACAACGTCATCTTCATCCGCA
GATCAACTTTTGCCTCACCGCTTTCGCCGCCACCACCATTTCCGGATTGCTTTTGCAACTTCCCACTTTCAGCAATACAC
CCACTATCGCGATGGCCGCCAGCGTTCTGCTGCTGGTGCCGGGGTTTCCGTTGATTAATGCCGTCGCCGATATGTTTAAA
GGCCACATCAATACCGGACTGGCACGCTGGGCGATCGCCAGTCTGCTGACACTGGCTACCTGCGTCGGCGTGGTGATGGC
ACTGACGATTTGGGGGCTACGCGGATGGGTGTGA

Upstream 100 bases:

>100_bases
CGGCGAGAGATAATTCGCTTTTTATCACCGAGCTTGTCCCGATAACCAGGATTAATCAGCGCAATTTTGATCTTAACCTA
CCGCAAAACAACCGTGCTTC

Downstream 100 bases:

>100_bases
TCGAGTTTCTGTTTGCATTGGCGCAGGATATGATCCTCGCCGCCATTCCAGCGGTCGGCTTTGCGATGGTGTTCAACGTT
CCCGTTCGGGCATTACGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIQMDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTT
IKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWD
GAVITFFASTAAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFK
GHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV

Sequences:

>Translated_277_residues
MIQMDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTT
IKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWD
GAVITFFASTAAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFK
GHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
>Mature_277_residues
MIQMDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTT
IKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWD
GAVITFFASTAAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFK
GHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=256, Percent_Identity=99.21875, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 30517; Mature: 30517

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQMDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGR
CCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDY
HHCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCH
KGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFK
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQMDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGR
CCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDY
HHCHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCH
KGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFK
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
GHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]