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The map label for this gene is ydiU [H]

Identifier: 187732402

GI number: 187732402

Start: 1752776

End: 1754212

Strand: Reverse

Name: ydiU [H]

Synonym: SbBS512_E1910

Alternate gene names: 187732402

Gene position: 1754212-1752776 (Counterclockwise)

Preceding gene: 187734225

Following gene: 187732186

Centisome position: 38.0

GC content: 52.4

Gene sequence:

>1437_bases
ATGACCCTGTCTTTTGTTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAA
TGCCCGGCTGGTTTGGCATAATACCGAACTGGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTG
TCTGGGGCGGCGAAGCCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCG
GGCCAACTGGGTGATGGGCGCGGCATTTTACTCGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAA
AGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCA
GTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAA
ACGGCGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTACCG
CCGCGAGTCGGAAAAGGTTCGTCAGTTAGCTGACTTTGCTATTCGTCATTACTGGTCACATCTTGAAGATGATGAGGACA
AATACCGTCTCTGGTTTAGCGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCACAT
GGGGTGATGAATACCGACAACATGTCGCTGCTGGGACTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGA
ACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTATAGCTTTGATAATCAACCTGCTGTCGCGTTGTGGAATT
TACAGCGTCTGGCGCAGACATTGTCACCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTT
TTGTTGACGCATTATGGACAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAA
TGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACA
GCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTG
CAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCAGCTCTGGTATTGCGCAACTGGTT
GGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGATGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTT
TCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA

Upstream 100 bases:

>100_bases
TTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAACCCTTCTGTTTGCTGGTGTTTAAGACGAGAGTAACCGTCTAC
ACTATCAAACAGGAGGATCT

Downstream 100 bases:

>100_bases
AGGCTACTTAGTTAACAGCAGCTTGCCAGCCTGAGTTTTACGGAGCAGATATTCTTGCCCGTCATGATCGATAATCAGTT
TGCCATCCGGACCTAACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Sequences:

>Translated_478_residues
MTLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
>Mature_477_residues
TLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAG
QLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRET
AEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAHG
VMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVL
LTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQ
QDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=43.3420365535248, Blast_Score=295, Evalue=7e-80,
Organism=Escherichia coli, GI1787999, Length=478, Percent_Identity=99.163179916318, Blast_Score=981, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=344, Percent_Identity=37.2093023255814, Blast_Score=223, Evalue=8e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54456; Mature: 54325

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIPSSLFKNGAGVWGGEAL
CCCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHCCCCCCCCCHH
LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHCCCCCHHHHHHHCHHHHCCCC
FEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TLSFVTRWRDELPETYTALSPTPLNNARLVWHNTELANTLSIPSSLFKNGAGVWGGEAL
CCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHCCCCCCCCCHH
LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHCCCCCHHHHHHHCHHHHCCCC
FEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA