Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is ybeZ [H]

Identifier: 187732299

GI number: 187732299

Start: 560483

End: 561523

Strand: Direct

Name: ybeZ [H]

Synonym: SbBS512_E0587

Alternate gene names: 187732299

Gene position: 560483-561523 (Clockwise)

Preceding gene: 187733108

Following gene: 187730605

Centisome position: 12.14

GC content: 54.47

Gene sequence:

>1041_bases
TTGAACATAGACACTCGCGAAATCACCCTGGAGCCAGCAGACAACGCGCGTCTGTTGAGCCTGTGCGGCCCGTTTGATGA
CAACATCAAGCAGCTCGAACGCCGTCTCGGCATCGAGATCAATCGCCGCGACAACCACTTTAAACTGACCGGCCGTCCGA
TTTGCGTCACCGCTGCGGCAGACATTCTGCGTAGCCTGTATGTCGATACAGCCCCGATGCGCGGTCAGATTCAGGATATC
GAACCGGAACAGATCCACCTTACGATTAAAGAAGCGCGAGTACTGGAGCAAAGTGCGGAGAGCGTGCCGGAGTACGGCAA
AGCGGTCAATATCAAAACCAAACGCGGCGTAATTAAGCCGCGCACGCCAAACCAGGCGCAGTACATCGCCAATATTCTCG
ACCATGACATTACCTTCGGCGTTGGCCCGGCGGGTACGGGTAAAACCTACCTGGCAGTGGCTGCGGCAGTTGATGCCCTG
GAGCGTCAGGAGATTCGCCGTATTCTGCTGACTCGTCCGGCGGTCGAAGCCGGTGAGAAACTGGGCTTCCTGCCTGGCGA
TTTAAGCCAGAAAGTAGACCCGTATCTGCGCCCACTGTACGACGCGCTGTTTGAAATGCTGGGCTTTGAGAAAGTTGAGA
AACTGATTGAGCGCAACGTTATTGAAGTCGCGCCGCTGGCCTATATGCGTGGTCGTACGCTGAACGACGCGTTTATCATT
CTCGATGAGAGCCAGAACACCACCATCGAACAGATGAAGATGTTCCTGACCCGTATCGGTTTTAACTCAAAAGCGGTTAT
CACCGGCGACGTCACACAGATCGACCTGCCGCGTAATACTAAATCAGGCTTACGTCACGCCATCGAAGTACTGGCCGATG
TCGAAGAGATCAGCTTTAACTTCTTCCACAGCGAAGACGTGGTTCGTCACCCTGTGGTGGCGCGTATCGTTAACGCCTAT
GAAGCCTGGGAAGAAGCCGAACAAAAACGAAAAGCGGCGCTGGCGGCAGAACGCAAGCGCGAAGAACAGGAACAAAAATG
A

Upstream 100 bases:

>100_bases
CTTTATCGCAATGCTTGCGCCTTTTTCCTGTGGCGTGAATAATTTCCTTATAGGCCGGTGAATGTTCAGCTTCCGGCGGC
ATACAGATAAGAGGAACGGT

Downstream 100 bases:

>100_bases
GTCAGGTGATCCTCGATTTACAACTGGCATGTGAAGATAATTCCGGGTTACCGGAAGAGAGCCAGTTTCAAACATGGCTG
AATGCGGTGATCCCGCAGTT

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDI
EPEQIHLTIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII
LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAY
EAWEEAEQKRKAALAAERKREEQEQK

Sequences:

>Translated_346_residues
MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDI
EPEQIHLTIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII
LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAY
EAWEEAEQKRKAALAAERKREEQEQK
>Mature_346_residues
MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDI
EPEQIHLTIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDAL
ERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII
LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAY
EAWEEAEQKRKAALAAERKREEQEQK

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=346, Percent_Identity=99.7109826589595, Blast_Score=705, Evalue=0.0,
Organism=Escherichia coli, GI1787257, Length=233, Percent_Identity=41.6309012875536, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 39069; Mature: 39069

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAA
CCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEEEECCCCEEHHHHH
DILRSLYVDTAPMRGQIQDIEPEQIHLTIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP
HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEHHCCCCCC
RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK
CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII
CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEE
LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFN
EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
FFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAA
CCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEEEECCCCEEHHHHH
DILRSLYVDTAPMRGQIQDIEPEQIHLTIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP
HHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEHHCCCCCC
RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK
CCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII
CCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEE
LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFN
EECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
FFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]