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The map label for this gene is yafL [H]

Identifier: 187732220

GI number: 187732220

Start: 232357

End: 233106

Strand: Direct

Name: yafL [H]

Synonym: SbBS512_E0223

Alternate gene names: 187732220

Gene position: 232357-233106 (Clockwise)

Preceding gene: 187732661

Following gene: 187731740

Centisome position: 5.03

GC content: 52.53

Gene sequence:

>750_bases
ATGTCTTCGTTCTTGCTCGGCAGATTTCTGCATCCAGGCGTGTTTTCGTTATGCGTTTTGCTCCCTTTACTCGCCAGCGC
CACCACATCACATATCTCTTTCAGCTACGCCGCCCGCCAGCGGATGCAAAACCGTGCGCGTTTATTAAAACAGTACCAAA
CCCATCTGAAAAAACAGGCCAGCTACATTGTGGAAGGCAATGCCGAAAGCAGAAGGGCGCTACGCCAGCACAACCGGGAG
CAGATAAAACAGCATCCAGAATGGTTTCCTGCGCCGCTCAAGGCAAGTGACAGACGCTGGCAGGCGTTGGTAGAAAACAA
TCATTTCCTCAGCAGCAACCACCTGCATAATATCACCGAAGTGGCGATTCACCGTCTGGAGCAACAGCTTGGCAAGCCTT
ACGTCTGGGGCGGCACGCGGCCCGATCAAGGCTTCGACTGTAGCGGGTTGGTTTTTTATGCCTACAACAAGATCCTTGAG
GCTAAGCTCCCGCGCACGGCTAATGAGATGTATCACTACCATCGGGCAACCATTGTGGCAAATAACGACCTGCGCCGGGG
AGATTTGCTGTTTTTCCATATCCACAGCCGTGAAATTGCCGACCATATGGGCGTGTATCTGGGAGACGGTCAGTTTATTG
AGTCGCCGCGCATGGGGGAAACCATTCGGGTAAGTCGGTTAGCTGAACCTTTCTGGCAGGATCATTTTTTGGGCGCGCGG
TGGATATTGACGGAAGAGACGATTTTGTAG

Upstream 100 bases:

>100_bases
TGAAACCTCAATAGTAATATGCAAATAAGCAATTAATAATCCCGTTTACTCCTCCGGTCTTTTAAAATTCTCACCTTCAT
TCAGCCGGTTTATGTCCTTC

Downstream 100 bases:

>100_bases
GACGGATAAGGCGTTTACGCCGCATCCGGCGGTGGTGCGCAGATGCCTGATGCGACGCTGACGCGTCTTATCATGCCTAC
AAATCTGTGCGTTTTTGCGA

Product: YafL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNRE
QIKQHPEWFPAPLKASDRRWQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILE
AKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRMGETIRVSRLAEPFWQDHFLGAR
WILTEETIL

Sequences:

>Translated_249_residues
MSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNRE
QIKQHPEWFPAPLKASDRRWQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILE
AKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRMGETIRVSRLAEPFWQDHFLGAR
WILTEETIL
>Mature_248_residues
SSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQ
IKQHPEWFPAPLKASDRRWQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEA
KLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRMGETIRVSRLAEPFWQDHFLGARW
ILTEETIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=249, Percent_Identity=89.1566265060241, Blast_Score=462, Evalue=1e-131,
Organism=Escherichia coli, GI1787944, Length=134, Percent_Identity=50, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 28958; Mature: 28827

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQA
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALVENNHFLSSNHLHNITE
CEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCHHHHH
VAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYHRATIVA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEE
NNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRMGETIRVSRLAEPFWQDHFLGAR
CCCCCCCCEEEEEECCHHHHHHCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCE
WILTEETIL
EEECCCCCC
>Mature Secondary Structure 
SSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQA
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALVENNHFLSSNHLHNITE
CEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEECCCCCHHHHH
VAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYHRATIVA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEE
NNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRMGETIRVSRLAEPFWQDHFLGAR
CCCCCCCCEEEEEECCHHHHHHCCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCE
WILTEETIL
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]