| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ydjO [H]
Identifier: 187732213
GI number: 187732213
Start: 1804835
End: 1804960
Strand: Reverse
Name: ydjO [H]
Synonym: SbBS512_E1975
Alternate gene names: 187732213
Gene position: 1804960-1804835 (Counterclockwise)
Preceding gene: 187732755
Following gene: 187730747
Centisome position: 39.1
GC content: 42.06
Gene sequence:
>126_bases TTGGAGTCATTACCCATTTTTTTCGCTGACGATCTGTTTAAATATGAGTCAGTATGCATCGCCGCGATGGAACATTTAAA AAGTAAAGCAACGGCCCCTATACAAAACGGACCGTTGCCAGCATAA
Upstream 100 bases:
>100_bases CTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCGTGACAAGGTCATCGGGCATTATCTGAA CATAAAACACTATCAGTAAG
Downstream 100 bases:
>100_bases GAATTAACGGTGTGCCAGTTCGGCGTCGTCTTCGCTATCCAGAATGGCTTTATCGGTTTGCTTCAGCCACTGGCTGGTCA GCGTGCCAGCTGTCATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 41
Protein sequence:
>41_residues MESLPIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA
Sequences:
>Translated_41_residues MESLPIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA >Mature_41_residues MESLPIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510948, Length=41, Percent_Identity=90.2439024390244, Blast_Score=81, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4495; Mature: 4495
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLPIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MESLPIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]