| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is 187732189
Identifier: 187732189
GI number: 187732189
Start: 3604216
End: 3604518
Strand: Reverse
Name: 187732189
Synonym: SbBS512_E3880
Alternate gene names: NA
Gene position: 3604518-3604216 (Counterclockwise)
Preceding gene: 187731016
Following gene: 187730562
Centisome position: 78.09
GC content: 47.52
Gene sequence:
>303_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA GTTGGCAGCATTACCGGGGCTCGCAGCGTTACGGCTGCAATAAAGCCGGATATAAAGCTGCAACCTACCCGTCATGTCAA AACAATGGATGCCTTGCAAACGGGATGCGTTCATATAAAAATATTATGGACCACACAAAATGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases TGACTAAAACCCAAATAAATTAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGCACCGCTCAAGGAATCA TTTATTGAAAGTATAATCCA
Product: transposase
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRGSQRYGCNKAGYKAATYPSCQ NNGCLANGMRSYKNIMDHTK
Sequences:
>Translated_100_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRGSQRYGCNKAGYKAATYPSCQ NNGCLANGMRSYKNIMDHTK >Mature_99_residues PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRGSQRYGCNKAGYKAATYPSCQN NGCLANGMRSYKNIMDHTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10763; Mature: 10632
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRG CCCCHHHHHEEHEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQRYGCNKAGYKAATYPSCQNNGCLANGMRSYKNIMDHTK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRG CCCHHHHHEEHEECCCEEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SQRYGCNKAGYKAATYPSCQNNGCLANGMRSYKNIMDHTK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA