| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is zraP
Identifier: 187732142
GI number: 187732142
Start: 4202120
End: 4202686
Strand: Reverse
Name: zraP
Synonym: SbBS512_E4493
Alternate gene names: 187732142
Gene position: 4202686-4202120 (Counterclockwise)
Preceding gene: 187730149
Following gene: 187730310
Centisome position: 91.05
GC content: 51.68
Gene sequence:
>567_bases ATGAGTAAAAATGACTCGCTACCCGCAGCAGGCGAGTCATTTTTACTCGTTTATCATGCCAGATTACCCGTCATATCAGC GTTTCATCGTTGGCACGGAAGATGCAATACCCGAAGTAAGACAACCACTGGAGGATTAACCATGAAACGGAACACGAAAA TTGCCCTGGTAATGATGGCGCTTTCAGCAATGGCGATGGGATCGACATCTGCATTTGCTCACGGCGGACACGGTATGTGG CAGCAAAATGCCGCGCCTTTGACCAGCGAACAACAGACAGCGTGGCAGAAAATCCATAATGACTTTTACGCTCAAAGCAG CGCACTGCAACAGCAACTGGTGACGAAGCGTTATGAATACAATGCCCTGTTAGCCGCGAACCCACCGGATAGCAGCAAAA TTAACGCGGTCGCCAAAGAGATGGAGAATTTGCGTCAGTCGTTAGATGAGTTACGGGTGAAACGAGATATCGCGATGGCT GAAGCGGGTATTCCGCGCGGAGCCGGAATGGGCATGGGCTACGGCGGCTGCGGTGGTGGCGGTCATATGGGTATGGGCCA CTGGTAA
Upstream 100 bases:
>100_bases GCATCTTCTTCTTTGCCTGCTCATCCCTTTCTGACAGCAGAAATCATGCCATCTTTTATCAGCGCTTACCCTGCGCTGTA ACACAAAGGCTTAAGTTTCA
Downstream 100 bases:
>100_bases ATCAGAACGTTTTCTCGTTGGGTTGCCAGCGACAGAAATCAGAGTTTGCCACTAACAGTAATTGCGAACCTTCGGGCGCT TCCAGCCATGCCACGCTGAC
Product: zinc resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKRNTKIALVMMALSAMAMGSTSAFAHGGHGMW QQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMA EAGIPRGAGMGMGYGGCGGGGHMGMGHW
Sequences:
>Translated_188_residues MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKRNTKIALVMMALSAMAMGSTSAFAHGGHGMW QQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMA EAGIPRGAGMGMGYGGCGGGGHMGMGHW >Mature_187_residues SKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQ QNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAE AGIPRGAGMGMGYGGCGGGGHMGMGHW
Specific function: Binds zinc. Could be an important component of the zinc- balancing mechanism [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082358, Length=141, Percent_Identity=100, Blast_Score=292, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20368; Mature: 20236
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKRNTKIALVMMA CCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHH LSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEY HHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRGAGMGMGYGGCGGG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GHMGMGHW CCCCCCCC >Mature Secondary Structure SKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKRNTKIALVMMA CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHH LSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEY HHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRGAGMGMGYGGCGGG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GHMGMGHW CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]